Cluster: HRGMv2_2236_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2236
- CGC Family ID: CGCFAM_00491
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2236_15 | HRGMv2_2236_15_50 | 59771 | 60928 | + | GT4 |
| CAZyme | HRGMv2_2236_15 | HRGMv2_2236_15_51 | 60934 | 62031 | + | GT4 |
| pfam | HRGMv2_2236_15 | HRGMv2_2236_15_52 | 62059 | 63717 | + | DUF6020 |
| TC | HRGMv2_2236_15 | HRGMv2_2236_15_53 | 63719 | 65227 | + | 2.A.50.2.1 |
Gene ID: HRGMv2_2236_15_50
Type: CAZyme
Location: 59771 - 60928 (+)
Type: CAZyme
Location: 59771 - 60928 (+)
Gene ID: HRGMv2_2236_15_51
Type: CAZyme
Location: 60934 - 62031 (+)
Type: CAZyme
Location: 60934 - 62031 (+)
Gene ID: HRGMv2_2236_15_52
Type: pfam
Location: 62059 - 63717 (+)
Type: pfam
Location: 62059 - 63717 (+)
Gene ID: HRGMv2_2236_15_53
Type: TC
Location: 63719 - 65227 (+)
Type: TC
Location: 63719 - 65227 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934418125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.