dbCAN Logo

Cluster: HRGMv2_2236_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2236_15 HRGMv2_2236_15_37 42772 43728 + GT2
pfam HRGMv2_2236_15 HRGMv2_2236_15_38 43697 45556 + DUF6020
NULL(UNKNOWN) HRGMv2_2236_15 HRGMv2_2236_15_39 45609 48101 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2236_15 HRGMv2_2236_15_40 48118 49995 + 9.B.18.2.1
STP HRGMv2_2236_15 HRGMv2_2236_15_41 50010 51143 + Aminotran_1_2
TC HRGMv2_2236_15 HRGMv2_2236_15_42 51307 51957 + 9.B.18.1.2
pfam HRGMv2_2236_15 HRGMv2_2236_15_43 51954 52937 + ATP-grasp_3 | Dala_Dala_lig_C | RimK | ATPgrasp_Ter | PylC-like_N
CAZyme HRGMv2_2236_15 HRGMv2_2236_15_44 52964 54049 + GT4
Gene ID: HRGMv2_2236_15_37
Type: CAZyme
Location: 42772 - 43728 (+)
Gene ID: HRGMv2_2236_15_38
Type: pfam
Location: 43697 - 45556 (+)
Gene ID: HRGMv2_2236_15_39
Type:
Location: 45609 - 48101 (+)
Gene ID: HRGMv2_2236_15_40
Type: TC
Location: 48118 - 49995 (+)
Gene ID: HRGMv2_2236_15_41
Type: STP
Location: 50010 - 51143 (+)
Gene ID: HRGMv2_2236_15_42
Type: TC
Location: 51307 - 51957 (+)
Gene ID: HRGMv2_2236_15_43
Type: pfam
Location: 51954 - 52937 (+)
Gene ID: HRGMv2_2236_15_44
Type: CAZyme
Location: 52964 - 54049 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List