Cluster: HRGMv2_2236_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2236
- CGC Family ID: CGCFAM_00660
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2236_18 | HRGMv2_2236_18_16 | 16619 | 18235 | - | 3.B.1.1.5 |
| pfam | HRGMv2_2236_18 | HRGMv2_2236_18_17 | 18509 | 19645 | - | GLF | NAD_binding_8 |
| NULL(UNKNOWN) | HRGMv2_2236_18 | HRGMv2_2236_18_18 | 19666 | 20004 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2236_18 | HRGMv2_2236_18_19 | 20256 | 21314 | + | GT2 |
| CAZyme | HRGMv2_2236_18 | HRGMv2_2236_18_20 | 21332 | 22384 | + | GT2 |
Gene ID: HRGMv2_2236_18_16
Type: TC
Location: 16619 - 18235 (-)
Type: TC
Location: 16619 - 18235 (-)
Gene ID: HRGMv2_2236_18_17
Type: pfam
Location: 18509 - 19645 (-)
Type: pfam
Location: 18509 - 19645 (-)
Gene ID: HRGMv2_2236_18_18
Type:
Location: 19666 - 20004 (-)
Type:
Location: 19666 - 20004 (-)
Gene ID: HRGMv2_2236_18_19
Type: CAZyme
Location: 20256 - 21314 (+)
Type: CAZyme
Location: 20256 - 21314 (+)
Gene ID: HRGMv2_2236_18_20
Type: CAZyme
Location: 21332 - 22384 (+)
Type: CAZyme
Location: 21332 - 22384 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934418125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.