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Cluster: HRGMv2_2236_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2236_3 HRGMv2_2236_3_50 65321 66493 - GH25
pfam HRGMv2_2236_3 HRGMv2_2236_3_51 66690 67688 + ApbE
pfam HRGMv2_2236_3 HRGMv2_2236_3_52 67678 68703 - Aldo_ket_red | Fer4_9 | Fer4_17
TC HRGMv2_2236_3 HRGMv2_2236_3_53 68716 69507 - 3.D.6.1.3
TC HRGMv2_2236_3 HRGMv2_2236_3_54 69527 70105 - 3.D.6.1.2
TC HRGMv2_2236_3 HRGMv2_2236_3_55 70098 70811 - 3.D.6.1.2
TC HRGMv2_2236_3 HRGMv2_2236_3_56 70804 71412 - 3.D.6.1.2
TC HRGMv2_2236_3 HRGMv2_2236_3_57 71409 72341 - 3.D.6.1.2
TC HRGMv2_2236_3 HRGMv2_2236_3_58 72360 73676 - 3.D.6.1.2
Gene ID: HRGMv2_2236_3_50
Type: CAZyme
Location: 65321 - 66493 (-)
Gene ID: HRGMv2_2236_3_51
Type: pfam
Location: 66690 - 67688 (+)
Gene ID: HRGMv2_2236_3_52
Type: pfam
Location: 67678 - 68703 (-)
Gene ID: HRGMv2_2236_3_53
Type: TC
Location: 68716 - 69507 (-)
Gene ID: HRGMv2_2236_3_54
Type: TC
Location: 69527 - 70105 (-)
Gene ID: HRGMv2_2236_3_55
Type: TC
Location: 70098 - 70811 (-)
Gene ID: HRGMv2_2236_3_56
Type: TC
Location: 70804 - 71412 (-)
Gene ID: HRGMv2_2236_3_57
Type: TC
Location: 71409 - 72341 (-)
Gene ID: HRGMv2_2236_3_58
Type: TC
Location: 72360 - 73676 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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