dbCAN Logo

Cluster: HRGMv2_2236_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_60 69220 70176 + GT2
TC HRGMv2_2236_13 HRGMv2_2236_13_61 70199 71980 + 3.A.1.106.15
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_62 72008 72982 + GT2
pfam HRGMv2_2236_13 HRGMv2_2236_13_63 72983 73900 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_64 73901 74878 + GT2
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_65 74881 75648 + GT2
pfam HRGMv2_2236_13 HRGMv2_2236_13_66 75650 76678 + Glycos_transf_2
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_67 76692 77828 + GT4
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_68 77946 79220 + GT4
Gene ID: HRGMv2_2236_13_60
Type: CAZyme
Location: 69220 - 70176 (+)
Gene ID: HRGMv2_2236_13_61
Type: TC
Location: 70199 - 71980 (+)
Gene ID: HRGMv2_2236_13_62
Type: CAZyme
Location: 72008 - 72982 (+)
Gene ID: HRGMv2_2236_13_63
Type: pfam
Location: 72983 - 73900 (+)
Gene ID: HRGMv2_2236_13_64
Type: CAZyme
Location: 73901 - 74878 (+)
Gene ID: HRGMv2_2236_13_65
Type: CAZyme
Location: 74881 - 75648 (+)
Gene ID: HRGMv2_2236_13_66
Type: pfam
Location: 75650 - 76678 (+)
Gene ID: HRGMv2_2236_13_67
Type: CAZyme
Location: 76692 - 77828 (+)
Gene ID: HRGMv2_2236_13_68
Type: CAZyme
Location: 77946 - 79220 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List