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Cluster: HRGMv2_2236_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_1 2 1165 + GT4
NULL(UNKNOWN) HRGMv2_2236_13 HRGMv2_2236_13_2 1183 2271 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_2236_13 HRGMv2_2236_13_3 2306 4198 + C44.001
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_4 4203 5282 + GT2
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_5 5339 6238 + GT11
TC HRGMv2_2236_13 HRGMv2_2236_13_6 6260 8047 + 3.A.1.106.15
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_7 8301 9335 + GT11
pfam HRGMv2_2236_13 HRGMv2_2236_13_8 9355 10914 + DUF6056
pfam HRGMv2_2236_13 HRGMv2_2236_13_9 11007 11774 + DUF5672
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_10 11841 12785 + GT17
NULL(UNKNOWN) HRGMv2_2236_13 HRGMv2_2236_13_11 12822 14057 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2236_13 HRGMv2_2236_13_12 14119 15531 + 9.B.18.1.2
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_13 15548 16597 + GT4
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_14 16594 17619 + GT2
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_15 17616 18626 + GT2
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_16 18649 19569 + GT11
pfam HRGMv2_2236_13 HRGMv2_2236_13_17 19586 20779 + PS_pyruv_trans
TC HRGMv2_2236_13 HRGMv2_2236_13_18 20834 22369 + 2.A.66.1.40
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_19 22379 23413 + GH105
NULL(UNKNOWN) HRGMv2_2236_13 HRGMv2_2236_13_20 23507 25099 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_21 25123 27036 + GT26 | GT4
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_22 27051 28271 + GT4
pfam HRGMv2_2236_13 HRGMv2_2236_13_23 28288 29307 + Radical_SAM | SPASM
TF HRGMv2_2236_13 HRGMv2_2236_13_24 29336 30361 + SirB
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_25 30445 31593 + GT4
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_26 31628 32491 + GT101
TC HRGMv2_2236_13 HRGMv2_2236_13_27 32510 34282 + 3.A.1.106.15
NULL(UNKNOWN) HRGMv2_2236_13 HRGMv2_2236_13_28 34286 35857 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_29 35833 36561 + GT2
pfam HRGMv2_2236_13 HRGMv2_2236_13_30 36558 36923 + DUF2304
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_31 36904 38019 + GT4
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_32 38004 38918 + GT2
pfam HRGMv2_2236_13 HRGMv2_2236_13_33 38915 40129 + Glycos_transf_1 | Glyco_trans_1_4
CAZyme HRGMv2_2236_13 HRGMv2_2236_13_34 40195 41379 + GT4
Gene ID: HRGMv2_2236_13_1
Type: CAZyme
Location: 2 - 1165 (+)
Gene ID: HRGMv2_2236_13_2
Type:
Location: 1183 - 2271 (+)
Gene ID: HRGMv2_2236_13_3
Type: peptidase
Location: 2306 - 4198 (+)
Gene ID: HRGMv2_2236_13_4
Type: CAZyme
Location: 4203 - 5282 (+)
Gene ID: HRGMv2_2236_13_5
Type: CAZyme
Location: 5339 - 6238 (+)
Gene ID: HRGMv2_2236_13_6
Type: TC
Location: 6260 - 8047 (+)
Gene ID: HRGMv2_2236_13_7
Type: CAZyme
Location: 8301 - 9335 (+)
Gene ID: HRGMv2_2236_13_8
Type: pfam
Location: 9355 - 10914 (+)
Gene ID: HRGMv2_2236_13_9
Type: pfam
Location: 11007 - 11774 (+)
Gene ID: HRGMv2_2236_13_10
Type: CAZyme
Location: 11841 - 12785 (+)
Gene ID: HRGMv2_2236_13_11
Type:
Location: 12822 - 14057 (+)
Gene ID: HRGMv2_2236_13_12
Type: TC
Location: 14119 - 15531 (+)
Gene ID: HRGMv2_2236_13_13
Type: CAZyme
Location: 15548 - 16597 (+)
Gene ID: HRGMv2_2236_13_14
Type: CAZyme
Location: 16594 - 17619 (+)
Gene ID: HRGMv2_2236_13_15
Type: CAZyme
Location: 17616 - 18626 (+)
Gene ID: HRGMv2_2236_13_16
Type: CAZyme
Location: 18649 - 19569 (+)
Gene ID: HRGMv2_2236_13_17
Type: pfam
Location: 19586 - 20779 (+)
Gene ID: HRGMv2_2236_13_18
Type: TC
Location: 20834 - 22369 (+)
Gene ID: HRGMv2_2236_13_19
Type: CAZyme
Location: 22379 - 23413 (+)
Gene ID: HRGMv2_2236_13_20
Type:
Location: 23507 - 25099 (+)
Gene ID: HRGMv2_2236_13_21
Type: CAZyme
Location: 25123 - 27036 (+)
Gene ID: HRGMv2_2236_13_22
Type: CAZyme
Location: 27051 - 28271 (+)
Gene ID: HRGMv2_2236_13_23
Type: pfam
Location: 28288 - 29307 (+)
Gene ID: HRGMv2_2236_13_24
Type: TF
Location: 29336 - 30361 (+)
Gene ID: HRGMv2_2236_13_25
Type: CAZyme
Location: 30445 - 31593 (+)
Gene ID: HRGMv2_2236_13_26
Type: CAZyme
Location: 31628 - 32491 (+)
Gene ID: HRGMv2_2236_13_27
Type: TC
Location: 32510 - 34282 (+)
Gene ID: HRGMv2_2236_13_28
Type:
Location: 34286 - 35857 (+)
Gene ID: HRGMv2_2236_13_29
Type: CAZyme
Location: 35833 - 36561 (+)
Gene ID: HRGMv2_2236_13_30
Type: pfam
Location: 36558 - 36923 (+)
Gene ID: HRGMv2_2236_13_31
Type: CAZyme
Location: 36904 - 38019 (+)
Gene ID: HRGMv2_2236_13_32
Type: CAZyme
Location: 38004 - 38918 (+)
Gene ID: HRGMv2_2236_13_33
Type: pfam
Location: 38915 - 40129 (+)
Gene ID: HRGMv2_2236_13_34
Type: CAZyme
Location: 40195 - 41379 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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