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Cluster: HRGMv2_2236_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2236_38 HRGMv2_2236_38_8 5057 6880 - 1.B.52.2.2
TC HRGMv2_2236_38 HRGMv2_2236_38_9 6928 7788 - 3.A.1.1.13
TC HRGMv2_2236_38 HRGMv2_2236_38_10 7804 8718 - 3.A.1.1.4
NULL(UNKNOWN) HRGMv2_2236_38 HRGMv2_2236_38_11 8816 10243 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2236_38 HRGMv2_2236_38_12 10341 11354 - LacI
CAZyme HRGMv2_2236_38 HRGMv2_2236_38_13 11927 14362 + GH94
pfam HRGMv2_2236_38 HRGMv2_2236_38_14 14470 15072 - Radical_SAM
STP HRGMv2_2236_38 HRGMv2_2236_38_15 15136 15969 - PfkB
TC HRGMv2_2236_38 HRGMv2_2236_38_16 16080 17006 - 2.A.7.3.31
Gene ID: HRGMv2_2236_38_8
Type: TC
Location: 5057 - 6880 (-)
Gene ID: HRGMv2_2236_38_9
Type: TC
Location: 6928 - 7788 (-)
Gene ID: HRGMv2_2236_38_10
Type: TC
Location: 7804 - 8718 (-)
Gene ID: HRGMv2_2236_38_11
Type:
Location: 8816 - 10243 (-)
Gene ID: HRGMv2_2236_38_12
Type: TF
Location: 10341 - 11354 (-)
Gene ID: HRGMv2_2236_38_13
Type: CAZyme
Location: 11927 - 14362 (+)
Gene ID: HRGMv2_2236_38_14
Type: pfam
Location: 14470 - 15072 (-)
Gene ID: HRGMv2_2236_38_15
Type: STP
Location: 15136 - 15969 (-)
Gene ID: HRGMv2_2236_38_16
Type: TC
Location: 16080 - 17006 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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