PROTEIN: HRGMv2_2236_38_11
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Protein File & Metadata
Source:
HRGMv2_2236_38_11.pdb
Genome ID:
Protein ID:
HRGMv2_2236_38_11
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Protein Sequence
MKKKVISALL STAMVASLLV GCGSSSADTA APADDAAAET TEEAPAEDAA PADDAAAEEA 60 APAGDEGQVL NIYCWNEEFK SRVTAHYADY EEVDATTGKI GDVTVKWNIT PNADNAYQNN 120 LDAALLNQES AAADDKIDIF LVEADYALKY VDSAYTMPLA DLGVTDADLA NQYQYTKDIV 180 TDSNGVLKGA SWQACPGVLF YNREAAKEVL GTDDPAEVQK YVSDWDTFTE TAATLKDAGY 240 SITSSANDTY RVYSNNVTTK WVEDGTVKID DNIMKWVDDS KKLVDAGYTK THDLWSDDWS 300 AGFYPDGKVF CYFGPAWLVN FSMAADTEGS IGNAGGWGAC EGPQGFYWGG TWICAAEGTD 360 NPSLVKDIIL TLTCNEDVMK EIVEQDDDFV NNKPAMEAMA ESDYSSKILG GQNPLGMYCA 420 NAGSIDLSNT CAYDQGCNEE FQKAMKNYFE GNATLDEALD LFYKAVVEKY PELTY 475
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132Z3C8-F1-model_v4 | 67 | 473 | 32 | 428 | 0.692 |
0.7982 |
| AF-Q8DRJ6-F1-model_v4 | 66 | 475 | 61 | 499 | 0.5301 |
0.6464 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 473 | 233 | 866 | 0.5594 |
0.7296 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 65 | 472 | 1 | 393 | 0.7853 |
0.8736 |
| 8bfy-assembly1.cif.gz_A | 68 | 472 | 1 | 393 | 0.7435 |
0.8312 |
| 3uor-assembly2.cif.gz_B | 68 | 474 | 1 | 388 | 0.7423 |
0.839 |
| 6x84-assembly2.cif.gz_B | 65 | 474 | 1 | 411 | 0.7336 |
0.8069 |
| 4rk2-assembly1.cif.gz_A | 66 | 471 | 1 | 393 | 0.7301 |
0.8151 |
| 7c0x-assembly2.cif.gz_B | 66 | 473 | 13 | 395 | 0.7273 |
0.8323 |
| 7c0k-assembly1.cif.gz_A | 66 | 473 | 14 | 396 | 0.7272 |
0.8331 |
| 7c0t-assembly2.cif.gz_B | 66 | 473 | 14 | 396 | 0.7262 |
0.832 |
| 7vfq-assembly1.cif.gz_A | 67 | 475 | 1 | 394 | 0.7255 |
0.8101 |
| 7c15-assembly2.cif.gz_B | 66 | 473 | 13 | 394 | 0.7255 |
0.8312 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 65 | 472 | 26 | 422 | 0.7398 |
0.8441 |
| AF-Q9KEE7-F1-model_v4 | 16 | 474 | 7 | 445 | 0.7228 |
0.7711 |
| AF-O31518-F1-model_v4 | 56 | 473 | 25 | 427 | 0.6851 |
0.7799 |
| AF-D4GP35-F1-model_v4 | 1 | 475 | 8 | 459 | 0.6563 |
0.6989 |
| AF-P58300-F1-model_v4 | 38 | 473 | 15 | 434 | 0.6399 |
0.7081 |
| AF-Q9V297-F1-model_v4 | 24 | 474 | 41 | 453 | 0.6267 |
0.7171 |