Cluster: HRGMv2_2236_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2236
- CGC Family ID: CGCFAM_00858
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2236_1 | HRGMv2_2236_1_209 | 229008 | 233240 | - | GH73 |
| TC | HRGMv2_2236_1 | HRGMv2_2236_1_210 | 233435 | 234763 | - | 9.B.174.1.1 |
| STP | HRGMv2_2236_1 | HRGMv2_2236_1_211 | 234782 | 236005 | - | Peptidase_M23 |
| pfam | HRGMv2_2236_1 | HRGMv2_2236_1_212 | 236029 | 236925 | - | FtsX | FtsX_ECD |
| TC | HRGMv2_2236_1 | HRGMv2_2236_1_213 | 236915 | 237652 | - | 3.A.1.140.1 |
Gene ID: HRGMv2_2236_1_209
Type: CAZyme
Location: 229008 - 233240 (-)
Type: CAZyme
Location: 229008 - 233240 (-)
Gene ID: HRGMv2_2236_1_210
Type: TC
Location: 233435 - 234763 (-)
Type: TC
Location: 233435 - 234763 (-)
Gene ID: HRGMv2_2236_1_211
Type: STP
Location: 234782 - 236005 (-)
Type: STP
Location: 234782 - 236005 (-)
Gene ID: HRGMv2_2236_1_212
Type: pfam
Location: 236029 - 236925 (-)
Type: pfam
Location: 236029 - 236925 (-)
Gene ID: HRGMv2_2236_1_213
Type: TC
Location: 236915 - 237652 (-)
Type: TC
Location: 236915 - 237652 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934418125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.