Cluster: HRGMv2_2236_CGC42
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2236
- CGC Family ID: CGCFAM_00207
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2236_29 | HRGMv2_2236_29_1 | 1 | 3825 | - | CBM54 |
| TC | HRGMv2_2236_29 | HRGMv2_2236_29_2 | 4093 | 5025 | - | 3.A.1.24.2 |
| TC | HRGMv2_2236_29 | HRGMv2_2236_29_3 | 5140 | 5802 | - | 3.A.1.24.5 |
| TC | HRGMv2_2236_29 | HRGMv2_2236_29_4 | 5792 | 6829 | - | 3.A.1.24.2 |
Gene ID: HRGMv2_2236_29_1
Type: CAZyme
Location: 1 - 3825 (-)
Type: CAZyme
Location: 1 - 3825 (-)
Gene ID: HRGMv2_2236_29_2
Type: TC
Location: 4093 - 5025 (-)
Type: TC
Location: 4093 - 5025 (-)
Gene ID: HRGMv2_2236_29_3
Type: TC
Location: 5140 - 5802 (-)
Type: TC
Location: 5140 - 5802 (-)
Gene ID: HRGMv2_2236_29_4
Type: TC
Location: 5792 - 6829 (-)
Type: TC
Location: 5792 - 6829 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934418125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.