Cluster: HRGMv2_2236_CGC45
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2236
- CGC Family ID: CGCFAM_02560
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2236_31 | HRGMv2_2236_31_11 | 10421 | 13291 | + | GH3 |
| pfam | HRGMv2_2236_31 | HRGMv2_2236_31_12 | 13413 | 14066 | + | DeoC |
| TC | HRGMv2_2236_31 | HRGMv2_2236_31_13 | 14068 | 15861 | - | 3.A.1.106.3 |
| TC | HRGMv2_2236_31 | HRGMv2_2236_31_14 | 15889 | 17625 | - | 3.A.1.106.3 |
Gene ID: HRGMv2_2236_31_11
Type: CAZyme
Location: 10421 - 13291 (+)
Type: CAZyme
Location: 10421 - 13291 (+)
Gene ID: HRGMv2_2236_31_12
Type: pfam
Location: 13413 - 14066 (+)
Type: pfam
Location: 13413 - 14066 (+)
Gene ID: HRGMv2_2236_31_13
Type: TC
Location: 14068 - 15861 (-)
Type: TC
Location: 14068 - 15861 (-)
Gene ID: HRGMv2_2236_31_14
Type: TC
Location: 15889 - 17625 (-)
Type: TC
Location: 15889 - 17625 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934418125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.