Cluster: HRGMv2_2236_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2236
- CGC Family ID: CGCFAM_02760
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2236_9 | HRGMv2_2236_9_63 | 59985 | 60872 | - | 3.A.1.1.34 |
| TC | HRGMv2_2236_9 | HRGMv2_2236_9_64 | 60874 | 61773 | - | 3.A.1.1.34 |
| STP | HRGMv2_2236_9 | HRGMv2_2236_9_65 | 61867 | 63336 | - | SBP_bac_1 |
| pfam | HRGMv2_2236_9 | HRGMv2_2236_9_66 | 63675 | 63968 | - | DUF6171 |
| CAZyme | HRGMv2_2236_9 | HRGMv2_2236_9_67 | 64003 | 65511 | - | GH51_1 |
| CAZyme | HRGMv2_2236_9 | HRGMv2_2236_9_68 | 65650 | 66600 | - | GH43_26 |
Gene ID: HRGMv2_2236_9_63
Type: TC
Location: 59985 - 60872 (-)
Type: TC
Location: 59985 - 60872 (-)
Gene ID: HRGMv2_2236_9_64
Type: TC
Location: 60874 - 61773 (-)
Type: TC
Location: 60874 - 61773 (-)
Gene ID: HRGMv2_2236_9_65
Type: STP
Location: 61867 - 63336 (-)
Type: STP
Location: 61867 - 63336 (-)
Gene ID: HRGMv2_2236_9_66
Type: pfam
Location: 63675 - 63968 (-)
Type: pfam
Location: 63675 - 63968 (-)
Gene ID: HRGMv2_2236_9_67
Type: CAZyme
Location: 64003 - 65511 (-)
Type: CAZyme
Location: 64003 - 65511 (-)
Gene ID: HRGMv2_2236_9_68
Type: CAZyme
Location: 65650 - 66600 (-)
Type: CAZyme
Location: 65650 - 66600 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934418125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.