Cluster: HRGMv2_2236_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2236
- CGC Family ID: CGCFAM_00198
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2236_4 | HRGMv2_2236_4_14 | 10755 | 12296 | - | GH13_44 |
| pfam | HRGMv2_2236_4 | HRGMv2_2236_4_15 | 12507 | 13385 | - | MMR_HSR1 | RsgA_GTPase | RsgA_N |
| TC | HRGMv2_2236_4 | HRGMv2_2236_4_16 | 13420 | 15537 | - | 9.B.106.2.2 |
Gene ID: HRGMv2_2236_4_14
Type: CAZyme
Location: 10755 - 12296 (-)
Type: CAZyme
Location: 10755 - 12296 (-)
Gene ID: HRGMv2_2236_4_15
Type: pfam
Location: 12507 - 13385 (-)
Type: pfam
Location: 12507 - 13385 (-)
Gene ID: HRGMv2_2236_4_16
Type: TC
Location: 13420 - 15537 (-)
Type: TC
Location: 13420 - 15537 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934418125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.