Cluster: HRGMv2_2236_CGC36
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2236
- CGC Family ID: CGCFAM_01456
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2236_21 | HRGMv2_2236_21_10 | 11971 | 13344 | + | 2.A.22.5.3 |
| pfam | HRGMv2_2236_21 | HRGMv2_2236_21_11 | 13485 | 14783 | + | AAA_14 | DUF4143 |
| CAZyme | HRGMv2_2236_21 | HRGMv2_2236_21_12 | 15021 | 17255 | + | GH3 |
Gene ID: HRGMv2_2236_21_10
Type: TC
Location: 11971 - 13344 (+)
Type: TC
Location: 11971 - 13344 (+)
Gene ID: HRGMv2_2236_21_11
Type: pfam
Location: 13485 - 14783 (+)
Type: pfam
Location: 13485 - 14783 (+)
Gene ID: HRGMv2_2236_21_12
Type: CAZyme
Location: 15021 - 17255 (+)
Type: CAZyme
Location: 15021 - 17255 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UBA3282
Species
UBA3282 sp934418125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.