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Cluster: HRGMv2_2236_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2236_6 HRGMv2_2236_6_57 58794 60293 + GH51_1
NULL(UNKNOWN) HRGMv2_2236_6 HRGMv2_2236_6_58 60345 60800 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2236_6 HRGMv2_2236_6_59 60938 62290 + MatE | MatE
CAZyme HRGMv2_2236_6 HRGMv2_2236_6_60 62394 63497 + GT111
pfam HRGMv2_2236_6 HRGMv2_2236_6_61 63504 64889 - DUF3298 | PdaC
TC HRGMv2_2236_6 HRGMv2_2236_6_62 64925 67027 - 1.B.52.2.2
pfam HRGMv2_2236_6 HRGMv2_2236_6_63 67267 68493 + UDPGP
pfam HRGMv2_2236_6 HRGMv2_2236_6_64 68697 69713 + adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | NAD_binding_4 | KR | NAD_binding_10 | GDP_Man_Dehyd
TC HRGMv2_2236_6 HRGMv2_2236_6_65 69815 70465 - 1.C.113.1.3
Gene ID: HRGMv2_2236_6_57
Type: CAZyme
Location: 58794 - 60293 (+)
Gene ID: HRGMv2_2236_6_58
Type:
Location: 60345 - 60800 (-)
Gene ID: HRGMv2_2236_6_59
Type: pfam
Location: 60938 - 62290 (+)
Gene ID: HRGMv2_2236_6_60
Type: CAZyme
Location: 62394 - 63497 (+)
Gene ID: HRGMv2_2236_6_61
Type: pfam
Location: 63504 - 64889 (-)
Gene ID: HRGMv2_2236_6_62
Type: TC
Location: 64925 - 67027 (-)
Gene ID: HRGMv2_2236_6_63
Type: pfam
Location: 67267 - 68493 (+)
Gene ID: HRGMv2_2236_6_64
Type: pfam
Location: 68697 - 69713 (+)
Gene ID: HRGMv2_2236_6_65
Type: TC
Location: 69815 - 70465 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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