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Genome Details

Selected Rep_genome_ID: HRGMv2_1901
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
Erysipelotrichales
→
Family
Coprobacillaceae
→
Genus
Coprobacillus
→
Species
Coprobacillus cateniformis
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A54.bin_31 3,751,544 99.06% 0.94% China(Inner Mongolia) Asia IMGG
AG528_74 3,164,049 94.81% 0.94% NA Africa H3AfricaPhase2
CGMR099678 3,379,543 100% 0% China Asia CGMR
HRGMv2_1901 3,415,132 100% 0% South Korea Asia HRGM
Rep_1234 3,660,180 99.5283% 0% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_1901_CGC27 CGCFAM_00012 Yes 3 2 host glycan/beta-glucan
HRGMv2_1901_CGC31 CGCFAM_00012 Yes 3 1 host glycan/beta-glucan
HRGMv2_1901_CGC20 CGCFAM_00020 Yes 6 1 host glycan/beta-glucan
HRGMv2_1901_CGC23 CGCFAM_00020 Yes 8 4 host glycan/beta-glucan
HRGMv2_1901_CGC44 CGCFAM_00020 Yes 5 1 host glycan/beta-glucan
HRGMv2_1901_CGC30 CGCFAM_00027 Yes 4 1
HRGMv2_1901_CGC36 CGCFAM_00029 Yes 5 1
HRGMv2_1901_CGC37 CGCFAM_00042 Yes 5 1 beta-glucan
HRGMv2_1901_CGC51 CGCFAM_00046 Yes 7 1
HRGMv2_1901_CGC16 CGCFAM_00066 Yes 3 1 beta-mannan
HRGMv2_1901_CGC26 CGCFAM_00090 Yes 3 2
HRGMv2_1901_CGC52 CGCFAM_00092 Yes 5 1
HRGMv2_1901_CGC49 CGCFAM_00137 Yes 3 1
HRGMv2_1901_CGC47 CGCFAM_00176 Yes 4 1 beta-glucan
HRGMv2_1901_CGC29 CGCFAM_00205 Yes 4 1
HRGMv2_1901_CGC48 CGCFAM_00343 Yes 4 1
HRGMv2_1901_CGC18 CGCFAM_00851 Yes 7 2
HRGMv2_1901_CGC14 CGCFAM_01147 Yes 3 1
HRGMv2_1901_CGC10 CGCFAM_01400 Yes 5 2
HRGMv2_1901_CGC5 CGCFAM_01833 Yes 4 1
HRGMv2_1901_CGC13 CGCFAM_01864 Yes 6 1
HRGMv2_1901_CGC42 CGCFAM_02353 Yes 6 3
HRGMv2_1901_CGC40 CGCFAM_02607 Yes 5 1
HRGMv2_1901_CGC4 CGCFAM_02887 Yes 7 2
HRGMv2_1901_CGC41 CGCFAM_02888 Yes 3 1
Top CAZyme Families