Cluster: HRGMv2_1901_CGC51
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1901
- CGC Family ID: CGCFAM_00046
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1901_29 | HRGMv2_1901_29_9 | 6166 | 7947 | + | 3.A.1.134.11 |
| TC | HRGMv2_1901_29 | HRGMv2_1901_29_10 | 7950 | 9803 | + | 3.A.1.134.11 |
| pfam | HRGMv2_1901_29 | HRGMv2_1901_29_11 | 10091 | 12487 | + | tRNA-synt_1 | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | tRNA-synt_1_2 |
| TC | HRGMv2_1901_29 | HRGMv2_1901_29_12 | 13134 | 14462 | + | 4.A.3.2.2 |
| TF | HRGMv2_1901_29 | HRGMv2_1901_29_13 | 14530 | 16407 | + | HTH_11 | Mga |
| TC | HRGMv2_1901_29 | HRGMv2_1901_29_14 | 16465 | 17964 | + | 4.A.3.2.8 |
| CAZyme | HRGMv2_1901_29 | HRGMv2_1901_29_15 | 18037 | 19449 | + | GH1 |
Gene ID: HRGMv2_1901_29_9
Type: TC
Location: 6166 - 7947 (+)
Type: TC
Location: 6166 - 7947 (+)
Gene ID: HRGMv2_1901_29_10
Type: TC
Location: 7950 - 9803 (+)
Type: TC
Location: 7950 - 9803 (+)
Gene ID: HRGMv2_1901_29_11
Type: pfam
Location: 10091 - 12487 (+)
Type: pfam
Location: 10091 - 12487 (+)
Gene ID: HRGMv2_1901_29_12
Type: TC
Location: 13134 - 14462 (+)
Type: TC
Location: 13134 - 14462 (+)
Gene ID: HRGMv2_1901_29_13
Type: TF
Location: 14530 - 16407 (+)
Type: TF
Location: 14530 - 16407 (+)
Gene ID: HRGMv2_1901_29_14
Type: TC
Location: 16465 - 17964 (+)
Type: TC
Location: 16465 - 17964 (+)
Gene ID: HRGMv2_1901_29_15
Type: CAZyme
Location: 18037 - 19449 (+)
Type: CAZyme
Location: 18037 - 19449 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.