Cluster: HRGMv2_1901_CGC31
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_1901
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1901_13 | HRGMv2_1901_13_36 | 32428 | 33813 | + | GH1 |
| TF | HRGMv2_1901_13 | HRGMv2_1901_13_37 | 33886 | 34599 | + | GntR |
| TC | HRGMv2_1901_13 | HRGMv2_1901_13_38 | 34741 | 36018 | + | 4.A.3.2.2 |
Gene ID: HRGMv2_1901_13_36
Type: CAZyme
Location: 32428 - 33813 (+)
Type: CAZyme
Location: 32428 - 33813 (+)
Gene ID: HRGMv2_1901_13_37
Type: TF
Location: 33886 - 34599 (+)
Type: TF
Location: 33886 - 34599 (+)
Gene ID: HRGMv2_1901_13_38
Type: TC
Location: 34741 - 36018 (+)
Type: TC
Location: 34741 - 36018 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.