Cluster: HRGMv2_1901_CGC48
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1901
- CGC Family ID: CGCFAM_00343
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1901_26 | HRGMv2_1901_26_50 | 50312 | 50632 | + | 4.A.3.2.3 |
| TC | HRGMv2_1901_26 | HRGMv2_1901_26_51 | 50664 | 51908 | + | 4.A.3.2.3 |
| TC | HRGMv2_1901_26 | HRGMv2_1901_26_52 | 51930 | 52310 | + | 4.A.3.2.3 |
| CAZyme | HRGMv2_1901_26 | HRGMv2_1901_26_53 | 52303 | 53754 | + | GH1 |
Gene ID: HRGMv2_1901_26_50
Type: TC
Location: 50312 - 50632 (+)
Type: TC
Location: 50312 - 50632 (+)
Gene ID: HRGMv2_1901_26_51
Type: TC
Location: 50664 - 51908 (+)
Type: TC
Location: 50664 - 51908 (+)
Gene ID: HRGMv2_1901_26_52
Type: TC
Location: 51930 - 52310 (+)
Type: TC
Location: 51930 - 52310 (+)
Gene ID: HRGMv2_1901_26_53
Type: CAZyme
Location: 52303 - 53754 (+)
Type: CAZyme
Location: 52303 - 53754 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.