Cluster: HRGMv2_1901_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1901
- CGC Family ID: CGCFAM_01400
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1901_5 | HRGMv2_1901_5_136 | 135523 | 137292 | - | GH35 |
| CAZyme | HRGMv2_1901_5 | HRGMv2_1901_5_137 | 137301 | 138461 | - | GH88 |
| TC | HRGMv2_1901_5 | HRGMv2_1901_5_138 | 138512 | 138988 | - | 4.A.6.1.13 |
| TC | HRGMv2_1901_5 | HRGMv2_1901_5_139 | 139005 | 139799 | - | 4.A.6.1.13 |
| TC | HRGMv2_1901_5 | HRGMv2_1901_5_140 | 139792 | 140256 | - | 4.A.6.1.13 |
Gene ID: HRGMv2_1901_5_136
Type: CAZyme
Location: 135523 - 137292 (-)
Type: CAZyme
Location: 135523 - 137292 (-)
Gene ID: HRGMv2_1901_5_137
Type: CAZyme
Location: 137301 - 138461 (-)
Type: CAZyme
Location: 137301 - 138461 (-)
Gene ID: HRGMv2_1901_5_138
Type: TC
Location: 138512 - 138988 (-)
Type: TC
Location: 138512 - 138988 (-)
Gene ID: HRGMv2_1901_5_139
Type: TC
Location: 139005 - 139799 (-)
Type: TC
Location: 139005 - 139799 (-)
Gene ID: HRGMv2_1901_5_140
Type: TC
Location: 139792 - 140256 (-)
Type: TC
Location: 139792 - 140256 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.