Cluster: HRGMv2_1901_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1901
- CGC Family ID: CGCFAM_01833
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1901_3 | HRGMv2_1901_3_15 | 18004 | 19092 | - | GT28 |
| TC | HRGMv2_1901_3 | HRGMv2_1901_3_16 | 19118 | 20203 | - | 2.A.103.1.3 |
| TC | HRGMv2_1901_3 | HRGMv2_1901_3_17 | 20417 | 22477 | - | 3.A.1.134.4 |
| TC | HRGMv2_1901_3 | HRGMv2_1901_3_18 | 22479 | 23231 | - | 3.A.1.134.12 |
Gene ID: HRGMv2_1901_3_15
Type: CAZyme
Location: 18004 - 19092 (-)
Type: CAZyme
Location: 18004 - 19092 (-)
Gene ID: HRGMv2_1901_3_16
Type: TC
Location: 19118 - 20203 (-)
Type: TC
Location: 19118 - 20203 (-)
Gene ID: HRGMv2_1901_3_17
Type: TC
Location: 20417 - 22477 (-)
Type: TC
Location: 20417 - 22477 (-)
Gene ID: HRGMv2_1901_3_18
Type: TC
Location: 22479 - 23231 (-)
Type: TC
Location: 22479 - 23231 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.