Cluster: HRGMv2_1901_CGC49
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1901
- CGC Family ID: CGCFAM_00137
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1901_27 | HRGMv2_1901_27_21 | 17855 | 18871 | + | GT2 |
| pfam | HRGMv2_1901_27 | HRGMv2_1901_27_22 | 18871 | 19518 | + | PAP2_3 |
| TC | HRGMv2_1901_27 | HRGMv2_1901_27_23 | 19606 | 21030 | + | 2.A.66.1.32 |
Gene ID: HRGMv2_1901_27_21
Type: CAZyme
Location: 17855 - 18871 (+)
Type: CAZyme
Location: 17855 - 18871 (+)
Gene ID: HRGMv2_1901_27_22
Type: pfam
Location: 18871 - 19518 (+)
Type: pfam
Location: 18871 - 19518 (+)
Gene ID: HRGMv2_1901_27_23
Type: TC
Location: 19606 - 21030 (+)
Type: TC
Location: 19606 - 21030 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.