Cluster: HRGMv2_1901_CGC27
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_1901
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1901_12 | HRGMv2_1901_12_43 | 38626 | 39915 | + | 4.A.3.2.2 |
| CAZyme | HRGMv2_1901_12 | HRGMv2_1901_12_44 | 39959 | 40693 | + | CE1 |
| CAZyme | HRGMv2_1901_12 | HRGMv2_1901_12_45 | 40705 | 42171 | + | GH1 |
Gene ID: HRGMv2_1901_12_43
Type: TC
Location: 38626 - 39915 (+)
Type: TC
Location: 38626 - 39915 (+)
Gene ID: HRGMv2_1901_12_44
Type: CAZyme
Location: 39959 - 40693 (+)
Type: CAZyme
Location: 39959 - 40693 (+)
Gene ID: HRGMv2_1901_12_45
Type: CAZyme
Location: 40705 - 42171 (+)
Type: CAZyme
Location: 40705 - 42171 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.