Cluster: HRGMv2_1901_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: beta-mannan
- Genome ID: HRGMv2_1901
- CGC Family ID: CGCFAM_00066
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1901_7 | HRGMv2_1901_7_25 | 26009 | 27325 | + | 4.A.3.2.8 |
| TC | HRGMv2_1901_7 | HRGMv2_1901_7_26 | 27329 | 27643 | + | 4.A.3.2.8 |
| CAZyme | HRGMv2_1901_7 | HRGMv2_1901_7_27 | 27645 | 29885 | + | GH95 |
Gene ID: HRGMv2_1901_7_25
Type: TC
Location: 26009 - 27325 (+)
Type: TC
Location: 26009 - 27325 (+)
Gene ID: HRGMv2_1901_7_26
Type: TC
Location: 27329 - 27643 (+)
Type: TC
Location: 27329 - 27643 (+)
Gene ID: HRGMv2_1901_7_27
Type: CAZyme
Location: 27645 - 29885 (+)
Type: CAZyme
Location: 27645 - 29885 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.