Cluster: HRGMv2_1901_CGC26
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1901
- CGC Family ID: CGCFAM_00090
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1901_12 | HRGMv2_1901_12_21 | 18667 | 20580 | + | 4.A.1.2.9 |
| CAZyme | HRGMv2_1901_12 | HRGMv2_1901_12_22 | 20592 | 22031 | + | GH32 |
| CAZyme | HRGMv2_1901_12 | HRGMv2_1901_12_23 | 22040 | 23449 | + | GH32 |
Gene ID: HRGMv2_1901_12_21
Type: TC
Location: 18667 - 20580 (+)
Type: TC
Location: 18667 - 20580 (+)
Gene ID: HRGMv2_1901_12_22
Type: CAZyme
Location: 20592 - 22031 (+)
Type: CAZyme
Location: 20592 - 22031 (+)
Gene ID: HRGMv2_1901_12_23
Type: CAZyme
Location: 22040 - 23449 (+)
Type: CAZyme
Location: 22040 - 23449 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.