y
Basic Information | |
---|---|
Species | Citrus sinensis |
Cazyme ID | orange1.1g043682m |
Family | GH17 |
Protein Properties | Length: 361 Molecular Weight: 39829.6 Isoelectric Point: 5.1442 |
Chromosome | Chromosome/Scaffold: 00082 Start: 271748 End: 273857 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 26 | 322 | 0 |
VGINYGQIANNLPSPSRVSVLLRSLNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPAKAQIGNEVFKGEDTKLYSYLLPAMQTVYKTLVDL GLDKQVIVTSAHSLDILANSFPPSAGSFRQDLAVYIQPILSFHSQVKSPFLINAYPYFAYKDSPNQVPLDYVLFQPNQGTTDPITNLKYDNMLYAQIDAV YSAMKAMGHTDIEVRISETGWPSKGDENEAGATVENAELYNGNLLKRIQQKQGTPGKPSVPVDVYFFALFNENLKPGPTSERNYGLYYPNGNPVYNI |
Full Sequence |
---|
Protein Sequence Length: 361 Download |
VRSPLFCFAL LCLVDSVPRI QGLPGVGINY GQIANNLPSP SRVSVLLRSL NISRVKLYDT 60 DPVVLSAFSN SNVDFIIGLG NEYLENMTDP AKAQIGNEVF KGEDTKLYSY LLPAMQTVYK 120 TLVDLGLDKQ VIVTSAHSLD ILANSFPPSA GSFRQDLAVY IQPILSFHSQ VKSPFLINAY 180 PYFAYKDSPN QVPLDYVLFQ PNQGTTDPIT NLKYDNMLYA QIDAVYSAMK AMGHTDIEVR 240 ISETGWPSKG DENEAGATVE NAELYNGNLL KRIQQKQGTP GKPSVPVDVY FFALFNENLK 300 PGPTSERNYG LYYPNGNPVY NIGIKGYLPE MDYSSASPKI KILPVCLSLL IYVIAYLIYA 360 * 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-6 | 166 | 315 | 153 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 5.0e-79 | 26 | 322 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94377.1 | 0 | 25 | 360 | 26 | 379 | unknown [Populus trichocarpa] |
GenBank | ACU21124.1 | 0 | 27 | 359 | 38 | 385 | unknown [Glycine max] |
RefSeq | NP_565652.1 | 0 | 19 | 358 | 23 | 382 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002328249.1 | 0 | 19 | 342 | 23 | 365 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523810.1 | 0 | 19 | 336 | 7 | 343 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 26 | 322 | 2 | 313 | A Chain A, Crystal Structure Of A Sigma54-activator Suggests The Mechanism For The Conformational Switch Necessary For Sigma54 Binding |
PDB | 3f55_C | 0 | 26 | 322 | 2 | 313 | A Chain A, Crystal Structure Of A Sigma54-activator Suggests The Mechanism For The Conformational Switch Necessary For Sigma54 Binding |
PDB | 3f55_B | 0 | 26 | 322 | 2 | 313 | A Chain A, Crystal Structure Of A Sigma54-activator Suggests The Mechanism For The Conformational Switch Necessary For Sigma54 Binding |
PDB | 3f55_A | 0 | 26 | 322 | 2 | 313 | A Chain A, Crystal Structure Of A Sigma54-activator Suggests The Mechanism For The Conformational Switch Necessary For Sigma54 Binding |
PDB | 3em5_D | 0 | 26 | 322 | 2 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |