y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr4g114850.1 |
Family | GH17 |
Protein Properties | Length: 387 Molecular Weight: 43008.1 Isoelectric Point: 8.3824 |
Chromosome | Chromosome/Scaffold: 4 Start: 39518712 End: 39522055 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 27 | 345 | 0 |
GINYGRIADNIPSPDEVVTLLRAAKIRNIRIYDADHSVLKAFSGTGLDIVIGVTNGQLQDMSSSADHALNWVKQNVQAFLPETRIRGIAVGNEVLGGSNN ALWGVLLDAAKNIYNATKKLHLDKLIQISTAHSFAVFQTSYPPSSCKFNDNIKQYMKPLLEFFQQIGSPFCVNAYPFLVYIGDPENIDINYALFQPTKGI DDPVYKLHYDNMLDAQIDAAYTALEDAGFHKMEVIVTETGWASAGDQNEVGANVTNARTYNYNLRKRLAKKKGTPHRPKDVLKAYIFAIFNEDSKPGPTS ERNYGLFKADGSISYNVGF |
Full Sequence |
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Protein Sequence Length: 387 Download |
MIRRFFLLFF LFFTQFASLQ AFTGTYGINY GRIADNIPSP DEVVTLLRAA KIRNIRIYDA 60 DHSVLKAFSG TGLDIVIGVT NGQLQDMSSS ADHALNWVKQ NVQAFLPETR IRGIAVGNEV 120 LGGSNNALWG VLLDAAKNIY NATKKLHLDK LIQISTAHSF AVFQTSYPPS SCKFNDNIKQ 180 YMKPLLEFFQ QIGSPFCVNA YPFLVYIGDP ENIDINYALF QPTKGIDDPV YKLHYDNMLD 240 AQIDAAYTAL EDAGFHKMEV IVTETGWASA GDQNEVGANV TNARTYNYNL RKRLAKKKGT 300 PHRPKDVLKA YIFAIFNEDS KPGPTSERNY GLFKADGSIS YNVGFHGLNA GYSSHLSLKD 360 INTQGLSRSY AITIILCLST LILMIF* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0001 | 24 | 336 | 324 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 6.0e-94 | 27 | 345 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY25165.1 | 0 | 20 | 358 | 27 | 365 | beta-1,3-glucanase 1 [Ziziphus jujuba] |
RefSeq | NP_565627.1 | 0 | 21 | 385 | 29 | 388 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002282272.1 | 0 | 4 | 385 | 9 | 392 | PREDICTED: similar to beta-1,3-glucanase 1 [Vitis vinifera] |
RefSeq | XP_002308978.1 | 0 | 18 | 350 | 1 | 333 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325214.1 | 0 | 1 | 385 | 1 | 376 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 27 | 345 | 3 | 315 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 3f55_C | 0 | 27 | 345 | 3 | 315 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 3f55_B | 0 | 27 | 345 | 3 | 315 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 3f55_A | 0 | 27 | 345 | 3 | 315 | A Chain A, Structure Of The Thermostable Pectate Lyase Pl 47 |
PDB | 3em5_D | 0 | 27 | 345 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |