y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb10g002130.1 |
Family | GH17 |
Protein Properties | Length: 432 Molecular Weight: 44331.6 Isoelectric Point: 8.5494 |
Chromosome | Chromosome/Scaffold: 10 Start: 1819944 End: 1821945 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 32 | 351 | 0 |
LGINYGQVADNLPPPQAALLLLRALNATRVKLYDADARVLRAFAGSGVDFTVGVPDRLVPRMATDPSAAASWVRSNLLPHLPATSITAVTVGNEVLSGTN AAMLRSLLPAMESLHAALAACNLTSRVSVTTAHSLAVLSSSFPPSSAAFRREVVPYMAPLLGFLARTGAPFLVNAYPYFAYKADPDRVDLGYALFEANSA GVADAATGLRYDNMLHAMVDAARAAICRANYGKALEIRVSETGWPSQGDDDEAGATPENAARYNGNLMRLVAQGKGTPAAPGEPLQVYVFALFNEDQKPG PASERHYGLFKPDGTPAYDV |
Full Sequence |
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Protein Sequence Length: 432 Download |
MALHLMLAAA AAFAVLAPPA ASSGPTPAPP ALGINYGQVA DNLPPPQAAL LLLRALNATR 60 VKLYDADARV LRAFAGSGVD FTVGVPDRLV PRMATDPSAA ASWVRSNLLP HLPATSITAV 120 TVGNEVLSGT NAAMLRSLLP AMESLHAALA ACNLTSRVSV TTAHSLAVLS SSFPPSSAAF 180 RREVVPYMAP LLGFLARTGA PFLVNAYPYF AYKADPDRVD LGYALFEANS AGVADAATGL 240 RYDNMLHAMV DAARAAICRA NYGKALEIRV SETGWPSQGD DDEAGATPEN AARYNGNLMR 300 LVAQGKGTPA APGEPLQVYV FALFNEDQKP GPASERHYGL FKPDGTPAYD VGVKAPTITL 360 PKGNGSSGSG NNGTGGLVVA QGPGGADGVG PGTGYYTVSA AAMNKVKSRR RRCMESLVAA 420 AAVLAMVSGP C* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-5 | 61 | 344 | 291 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-90 | 34 | 351 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ06269.1 | 0 | 35 | 431 | 29 | 422 | putative beta-1,3-glucanase [Pennisetum glaucum] |
DDBJ | BAD67672.1 | 0 | 35 | 431 | 30 | 421 | putative beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
DDBJ | BAD67673.1 | 0 | 35 | 406 | 30 | 400 | putative beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
RefSeq | NP_001056696.1 | 0 | 35 | 431 | 56 | 447 | Os06g0131500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002437759.1 | 0 | 1 | 431 | 1 | 431 | hypothetical protein SORBIDRAFT_10g002130 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 32 | 351 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 32 | 353 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 32 | 353 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 32 | 353 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 32 | 353 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |