y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G184900.1 |
Family | GH17 |
Protein Properties | Length: 376 Molecular Weight: 40571.3 Isoelectric Point: 5.3793 |
Chromosome | Chromosome/Scaffold: 14 Start: 16161616 End: 16163069 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 28 | 346 | 0 |
IGINYGQVADNLPPPSSTAKLLQSTSIQKVRLYGSDPAIIKALANTGIGIVIGTANGDIPGLASDPNFAKSWINTNVLPFYPASNIILITVGNEVMTSND QNLMNKLLPAMQNVQNALNDASLGGKIKVSTVHSMGVLKQSEPPSSGSFDPSYGDLMKGLLEFNSANGSPFAINPYPYFAYRSDTRPETLAFCLFQPNAG RMDGNTKIKYMNMFDAQVDAVYSALNSMGFKNVEIVVAETGWPYKGDDNEVGPSIENAKAYNGNLIAHLRSLVGTPLMPGESVDTYLFAFYDEDLIKPGP GSERSSGLFKTGVTMVYDV |
Full Sequence |
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Protein Sequence Length: 376 Download |
MVVLPYTVAF LLLSFLQTVK IANSQSFIGI NYGQVADNLP PPSSTAKLLQ STSIQKVRLY 60 GSDPAIIKAL ANTGIGIVIG TANGDIPGLA SDPNFAKSWI NTNVLPFYPA SNIILITVGN 120 EVMTSNDQNL MNKLLPAMQN VQNALNDASL GGKIKVSTVH SMGVLKQSEP PSSGSFDPSY 180 GDLMKGLLEF NSANGSPFAI NPYPYFAYRS DTRPETLAFC LFQPNAGRMD GNTKIKYMNM 240 FDAQVDAVYS ALNSMGFKNV EIVVAETGWP YKGDDNEVGP SIENAKAYNG NLIAHLRSLV 300 GTPLMPGESV DTYLFAFYDE DLIKPGPGSE RSSGLFKTGV TMVYDVGLST SSQVRTKFMC 360 ISLVFRVFNS QVFYS* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-9 | 20 | 336 | 329 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-92 | 28 | 346 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002321266.1 | 0 | 1 | 375 | 1 | 374 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321274.1 | 0 | 1 | 375 | 1 | 374 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329953.1 | 0 | 1 | 373 | 1 | 372 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332466.1 | 0 | 1 | 353 | 1 | 353 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332467.1 | 0 | 1 | 375 | 1 | 375 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 346 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 28 | 346 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 28 | 346 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 28 | 349 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 28 | 349 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |