y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01036124001 |
Family | GH17 |
Protein Properties | Length: 432 Molecular Weight: 47672.2 Isoelectric Point: 5.3572 |
Chromosome | Chromosome/Scaffold: 6 Start: 20408629 End: 20410809 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 88 | 386 | 0 |
VGINYGQIANNLPSPSRVAVLLKSLNISRVKLYDADPNVLRAFSNSDVEFIIGLPNDNLAAMTDPTKAQAWIQQNVQPFLPQTKITCITVGNEILSGTDK HLELDDQVGVVTAHSLAILAESFPPSSGSFRQDLGGYLQPLLNFHSQINSPFLINAYPYFAYKDNPDEVSLDYVLFRPNQGTTDPVTNLKYDNMLYAQID AVYSAIKAMGHTDIVVRISETGWPSKGDSNEAGATRDNAGIYNSNLLQRIAENQSTPARPSLPIDIYVFALFNEDLKPGPTSERNYGLYYPDGTPVYDL |
Full Sequence |
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Protein Sequence Length: 432 Download |
MGTILTLFSK LCYNPHPKFY KGLTRNDTHT LLAICSDLDA WKKGLHAYLF PCFHIFFLLS 60 YSFRRLEIGE WRFSPDPNSV GLIHGIGVGI NYGQIANNLP SPSRVAVLLK SLNISRVKLY 120 DADPNVLRAF SNSDVEFIIG LPNDNLAAMT DPTKAQAWIQ QNVQPFLPQT KITCITVGNE 180 ILSGTDKHLE LDDQVGVVTA HSLAILAESF PPSSGSFRQD LGGYLQPLLN FHSQINSPFL 240 INAYPYFAYK DNPDEVSLDY VLFRPNQGTT DPVTNLKYDN MLYAQIDAVY SAIKAMGHTD 300 IVVRISETGW PSKGDSNEAG ATRDNAGIYN SNLLQRIAEN QSTPARPSLP IDIYVFALFN 360 EDLKPGPTSE RNYGLYYPDG TPVYDLGLQS QLPQIASAAF YIDSASTTNA VSIVSLLIFV 420 TLCLIIVREG L* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-11 | 74 | 379 | 323 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 5.0e-95 | 88 | 386 | 315 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU21124.1 | 0 | 84 | 429 | 33 | 388 | unknown [Glycine max] |
EMBL | CAN80621.1 | 0 | 40 | 431 | 62 | 460 | hypothetical protein [Vitis vinifera] |
EMBL | CBI28320.1 | 0 | 1 | 431 | 1 | 431 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002275642.1 | 0 | 47 | 431 | 25 | 399 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002523810.1 | 0 | 83 | 395 | 8 | 338 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 88 | 386 | 2 | 313 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3f55_C | 0 | 88 | 386 | 2 | 313 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3f55_B | 0 | 88 | 386 | 2 | 313 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3f55_A | 0 | 88 | 386 | 2 | 313 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3em5_D | 0 | 88 | 386 | 2 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |