y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 481526 |
Family | GH17 |
Protein Properties | Length: 387 Molecular Weight: 42918.4 Isoelectric Point: 7.9291 |
Chromosome | Chromosome/Scaffold: 4 Start: 9827001 End: 9829092 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 35 | 353 | 0 |
GINYGRIADNIPSPDKVVLLLKQAKIRNVRIYDADHTVLEAFSGTGLDLVVGLPNGFLKEMSSNADHAFSWVKENVQSFLPKTRIRGIAIGNEVLGGGDS ELAGALLGAAKNVYNALKKMNLEDTVQITTAHSQAVFSDSYPPSSCVFKENVVQFMKPLLEFFQQIGSPFCLNAYPFLAYTYNPKEIDINYALFKPTEGI YDPKTDLHYDNMLDAQIDAAYMALQDAGFKTMEVMITETGWASKGDSDEPAATPENARTYNYNLRKRLAKKKGTPLRPKTVLKAYIFALFNENSKPGKSS ETHFGLFKPDGTISYDIGF |
Full Sequence |
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Protein Sequence Length: 387 Download |
MRSSKLLLLK FFFVFFIFFF CVEFQVDGAF VGTYGINYGR IADNIPSPDK VVLLLKQAKI 60 RNVRIYDADH TVLEAFSGTG LDLVVGLPNG FLKEMSSNAD HAFSWVKENV QSFLPKTRIR 120 GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC 180 VFKENVVQFM KPLLEFFQQI GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD 240 LHYDNMLDAQ IDAAYMALQD AGFKTMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK 300 RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNSLKSDA 360 PKSLISSSKA ACYYVIISVS VFLLMI* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.004 | 258 | 344 | 90 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-99 | 35 | 353 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM67102.1 | 0 | 23 | 386 | 22 | 387 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
DDBJ | BAC43250.1 | 0 | 95 | 386 | 1 | 294 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
RefSeq | NP_565627.1 | 0 | 1 | 386 | 1 | 388 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_850082.1 | 0 | 95 | 386 | 1 | 294 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002308978.1 | 0 | 29 | 360 | 4 | 335 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 35 | 354 | 3 | 316 | A Chain A, Structure Of Methionyl-Trna Synthetase: Crystal For |
PDB | 3f55_C | 0 | 35 | 354 | 3 | 316 | A Chain A, Structure Of Methionyl-Trna Synthetase: Crystal For |
PDB | 3f55_B | 0 | 35 | 354 | 3 | 316 | A Chain A, Structure Of Methionyl-Trna Synthetase: Crystal For |
PDB | 3f55_A | 0 | 35 | 354 | 3 | 316 | A Chain A, Structure Of Methionyl-Trna Synthetase: Crystal For |
PDB | 3em5_D | 0 | 35 | 354 | 3 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |