y
Basic Information | |
---|---|
Species | Sorghum bicolor |
Cazyme ID | Sb09g021800.1 |
Family | GH17 |
Protein Properties | Length: 411 Molecular Weight: 43700.2 Isoelectric Point: 5.9478 |
Chromosome | Chromosome/Scaffold: 9 Start: 51337490 End: 51340379 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 59 | 374 | 0 |
GINYGQIANNLPHPAQVSGLLQSLNVNRVKLYDADPAVLTAFAGTGVEFIVGNEDLFNLTDARKARAWVAQHVQPFLPGTRITCITVGNEVLSGKDTAAM QSLLPAMQAVYQAVVALGLAGQVNVSTAHSVNILASSYPPSSGAFREELAEYIQPILNFHAEVGSPFLINAYPFFAYKASPGTVSLPYVLFEPNAGVVDP NTNLTYDNMLYAQIDAVYAAMKAMGHTDLTVRISETGWPSKGDDDEVGATVANAAAYNGNLMKRIAMGQGTPLKPRVPVDVFVFALFNEDMKPGPTSERN YGLFYPNGTQVYNLGF |
Full Sequence |
---|
Protein Sequence Length: 411 Download |
MARADDHRTV TMRSSPLPPP RCVVVVLLLL LPLPLPLLSL LSAINVASAA TAAAPLKFGI 60 NYGQIANNLP HPAQVSGLLQ SLNVNRVKLY DADPAVLTAF AGTGVEFIVG NEDLFNLTDA 120 RKARAWVAQH VQPFLPGTRI TCITVGNEVL SGKDTAAMQS LLPAMQAVYQ AVVALGLAGQ 180 VNVSTAHSVN ILASSYPPSS GAFREELAEY IQPILNFHAE VGSPFLINAY PFFAYKASPG 240 TVSLPYVLFE PNAGVVDPNT NLTYDNMLYA QIDAVYAAMK AMGHTDLTVR ISETGWPSKG 300 DDDEVGATVA NAAAYNGNLM KRIAMGQGTP LKPRVPVDVF VFALFNEDMK PGPTSERNYG 360 LFYPNGTQVY NLGFDGAAFS PSSPTYSSSS KLPAITFQMA VVVLLAGFFL * 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-8 | 140 | 365 | 230 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-96 | 59 | 374 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG28556.1 | 0 | 1 | 408 | 3 | 395 | glucan endo-1,3-beta-glucosidase 7 precursor [Zea mays] |
GenBank | EEC79302.1 | 0 | 46 | 410 | 29 | 393 | hypothetical protein OsI_20133 [Oryza sativa Indica Group] |
GenBank | EEE63886.1 | 0 | 88 | 410 | 36 | 359 | hypothetical protein OsJ_18711 [Oryza sativa Japonica Group] |
RefSeq | NP_001131225.1 | 0 | 1 | 408 | 3 | 394 | hypothetical protein LOC100192534 [Zea mays] |
RefSeq | XP_002441180.1 | 0 | 1 | 410 | 1 | 410 | hypothetical protein SORBIDRAFT_09g021800 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 59 | 374 | 3 | 315 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3f55_C | 0 | 59 | 374 | 3 | 315 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3f55_B | 0 | 59 | 374 | 3 | 315 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3f55_A | 0 | 59 | 374 | 3 | 315 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3em5_D | 0 | 59 | 374 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |