y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 491210 |
Family | GH17 |
Protein Properties | Length: 357 Molecular Weight: 37801.1 Isoelectric Point: 6.0241 |
Chromosome | Chromosome/Scaffold: 7 Start: 2763598 End: 2765749 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 26 | 343 | 0 |
IGVNYGQVADNLPPPSETAKLLQSTSIQKVRLYGADPAIIKALAGTGVGIVIGAANGDVPSFASDPNAATQWINSNVLPFYPASKIILITVGNEILMSND PNLVNQLLPAMQNVQKALEAVSLGGKIKVSTVHSMTVLGSSDPPSTGSFAPGYQTGLKGILQFLSDTGSPFAINPYPFFAYQSDPRPETLSFCLFQPNAG RVDSKTGIKYTNMFDAQVDAVHSALKSMGFEKVEIVVAETGWASRGDANEVGASVDNAKAYNGNLIAHLRSMVGTPLMPGKPVDTYLFALYDENLKPGPS SERAFGLFKTDLSMVYDV |
Full Sequence |
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Protein Sequence Length: 357 Download |
MALSISISLL LIFLSHFPSS HAEPFIGVNY GQVADNLPPP SETAKLLQST SIQKVRLYGA 60 DPAIIKALAG TGVGIVIGAA NGDVPSFASD PNAATQWINS NVLPFYPASK IILITVGNEI 120 LMSNDPNLVN QLLPAMQNVQ KALEAVSLGG KIKVSTVHSM TVLGSSDPPS TGSFAPGYQT 180 GLKGILQFLS DTGSPFAINP YPFFAYQSDP RPETLSFCLF QPNAGRVDSK TGIKYTNMFD 240 AQVDAVHSAL KSMGFEKVEI VVAETGWASR GDANEVGASV DNAKAYNGNL IAHLRSMVGT 300 PLMPGKPVDT YLFALYDENL KPGPSSERAF GLFKTDLSMV YDVGLAKSSS SSQVRY* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-5 | 98 | 336 | 242 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-95 | 26 | 343 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD22313.1 | 0 | 20 | 351 | 19 | 350 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
EMBL | CAA18827.1 | 0 | 22 | 356 | 1 | 335 | putative protein (fragment) [Arabidopsis thaliana] |
EMBL | CAB80165.1 | 0 | 1 | 356 | 1 | 356 | putative protein (fragment) [Arabidopsis thaliana] |
RefSeq | NP_179219.4 | 0 | 20 | 351 | 19 | 350 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_195174.6 | 0 | 1 | 353 | 1 | 353 | catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 343 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 26 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 26 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 26 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 26 | 346 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |