y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.018G129500.1 |
Family | GH17 |
Protein Properties | Length: 395 Molecular Weight: 43844.1 Isoelectric Point: 8.076 |
Chromosome | Chromosome/Scaffold: 18 Start: 15113521 End: 15116666 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 33 | 351 | 0 |
GINYGRIADNIPSPDEVATLLRAAKIKNVRIYDADHSVLKAFSGTGLQLVVGLPNGFVKEMSANASHAMAWVKENVQAFLPKTSVCGIAVGNEILGGGDY ELWEALLGAVKNIYNAVDKLGLADVVQISTAHSQAVFDNSYPPSSCIFRENVAQFMKPLLEFFSQIGSPFCLNAYPFLAYMSDPENIDINYALFQKTKGI YDMKTDLHYDNMLDAQIDATYAALEDAGFKKMEVIVTETGWASLGDTNEAAATVNNARTFNYNLRKRLAKKKGTPLRPKMVVKAYIFAIFNENLKSGPTS ERNFGLFKPDGSISYDIGF |
Full Sequence |
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Protein Sequence Length: 395 Download |
MKSHHHQLLF MFLVFFAQKI ELLTAETFTG TYGINYGRIA DNIPSPDEVA TLLRAAKIKN 60 VRIYDADHSV LKAFSGTGLQ LVVGLPNGFV KEMSANASHA MAWVKENVQA FLPKTSVCGI 120 AVGNEILGGG DYELWEALLG AVKNIYNAVD KLGLADVVQI STAHSQAVFD NSYPPSSCIF 180 RENVAQFMKP LLEFFSQIGS PFCLNAYPFL AYMSDPENID INYALFQKTK GIYDMKTDLH 240 YDNMLDAQID ATYAALEDAG FKKMEVIVTE TGWASLGDTN EAAATVNNAR TFNYNLRKRL 300 AKKKGTPLRP KMVVKAYIFA IFNENLKSGP TSERNFGLFK PDGSISYDIG FHGLSSAESS 360 LLSLKVRDSL YQHTRSFKRQ HIGIRTVYFL DKNN* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.001 | 30 | 342 | 328 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 5.0e-98 | 33 | 351 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAY25165.1 | 0 | 26 | 365 | 27 | 368 | beta-1,3-glucanase 1 [Ziziphus jujuba] |
RefSeq | NP_565627.1 | 0 | 28 | 363 | 30 | 366 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002282272.1 | 0 | 1 | 365 | 1 | 366 | PREDICTED: similar to beta-1,3-glucanase 1 [Vitis vinifera] |
RefSeq | XP_002308978.1 | 0 | 24 | 359 | 1 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325214.1 | 0 | 22 | 387 | 7 | 367 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 33 | 351 | 3 | 315 | A Chain A, X-Ray Structure Of 119-141 Znua Deletion Mutant From Salmonella Enterica |
PDB | 3f55_C | 0 | 33 | 351 | 3 | 315 | A Chain A, X-Ray Structure Of 119-141 Znua Deletion Mutant From Salmonella Enterica |
PDB | 3f55_B | 0 | 33 | 351 | 3 | 315 | A Chain A, X-Ray Structure Of 119-141 Znua Deletion Mutant From Salmonella Enterica |
PDB | 3f55_A | 0 | 33 | 351 | 3 | 315 | A Chain A, X-Ray Structure Of 119-141 Znua Deletion Mutant From Salmonella Enterica |
PDB | 3em5_D | 0 | 33 | 351 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |