y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.009G115400.6 |
Family | GH17 |
Protein Properties | Length: 359 Molecular Weight: 38362.8 Isoelectric Point: 4.8895 |
Chromosome | Chromosome/Scaffold: 09 Start: 9761871 End: 9765058 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 24 | 340 | 0 |
IGINYGQVADNLPPPSATAKLLQSTGVQKVRLYGADPAIIKALADTGIGIVIGAANGDIPALASDPNFATQWVNSNVLAYPSSKIILITVGNEVLLSNDQ NLISQLLPAMQNMQKALSSASLGGKVKVSTVHSMAILSQSDPPSSGLFSPAYQDTMKGLLQFQKDNGSPIAVNPYPFFAYQSDPRPETLAFCLFQPNSGR VDSGNGMKYMNMFDAQVDAVRSALNAMGFNDIEILVAETGWPYKGDSNEVGPSVENARAYNGNLISRLRSMVGTPLMPGKSVDTYIFALYDEDLKPGPAS ERSFGLFKPDLSMTYDI |
Full Sequence |
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Protein Sequence Length: 359 Download |
MAFSILILLY LLQSFNFASS QSFIGINYGQ VADNLPPPSA TAKLLQSTGV QKVRLYGADP 60 AIIKALADTG IGIVIGAANG DIPALASDPN FATQWVNSNV LAYPSSKIIL ITVGNEVLLS 120 NDQNLISQLL PAMQNMQKAL SSASLGGKVK VSTVHSMAIL SQSDPPSSGL FSPAYQDTMK 180 GLLQFQKDNG SPIAVNPYPF FAYQSDPRPE TLAFCLFQPN SGRVDSGNGM KYMNMFDAQV 240 DAVRSALNAM GFNDIEILVA ETGWPYKGDS NEVGPSVENA RAYNGNLISR LRSMVGTPLM 300 PGKSVDTYIF ALYDEDLKPG PASERSFGLF KPDLSMTYDI GLSKSSLVRT VPSFPSTL* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-10 | 18 | 333 | 331 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-96 | 24 | 340 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 1 | 357 | 1 | 358 | unknown [Populus trichocarpa] |
GenBank | ABK95837.1 | 0 | 1 | 352 | 1 | 352 | unknown [Populus trichocarpa] |
RefSeq | XP_002306099.1 | 0 | 1 | 348 | 1 | 349 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313051.1 | 0 | 1 | 347 | 1 | 347 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509479.1 | 0 | 13 | 357 | 17 | 362 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 24 | 340 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 24 | 343 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 24 | 343 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 24 | 343 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 24 | 343 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |