y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G018900.2 |
Family | GH17 |
Protein Properties | Length: 405 Molecular Weight: 43660.7 Isoelectric Point: 6.8735 |
Chromosome | Chromosome/Scaffold: 07 Start: 1414990 End: 1418096 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 344 | 0 |
GINYGQIADNLPLPEDVVPIVKSIGATKVKLYDADPKVLKAFANTGVEFIVGLGNEYLDKMRDPAKAQAWVKQNVQSHLPATKITCIFVGNEVLTFNDTS LSNSLLPAMQSVHTALVNLGLDKQVTVTTAHSLSILETSYPPSSGAFREDLVDCLSETLSFHQKTGSPFLINAYPFFAYKGNPKQVPLDFVLFQPNQGVI DPATNLHYDNMLYAQIDAVYNALASLGYKKLAVHISETGWPSKGDEDEVGATADNAKKYNGNLIKLMSKKTGTPMRPNSDLNIYVFALFNENMKPGPTSE RNYGLFKPDGTPAYSL |
Full Sequence |
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Protein Sequence Length: 405 Download |
MEFHRFFFYA SIILSISVYL FPIMANSMGI NYGQIADNLP LPEDVVPIVK SIGATKVKLY 60 DADPKVLKAF ANTGVEFIVG LGNEYLDKMR DPAKAQAWVK QNVQSHLPAT KITCIFVGNE 120 VLTFNDTSLS NSLLPAMQSV HTALVNLGLD KQVTVTTAHS LSILETSYPP SSGAFREDLV 180 DCLSETLSFH QKTGSPFLIN AYPFFAYKGN PKQVPLDFVL FQPNQGVIDP ATNLHYDNML 240 YAQIDAVYNA LASLGYKKLA VHISETGWPS KGDEDEVGAT ADNAKKYNGN LIKLMSKKTG 300 TPMRPNSDLN IYVFALFNEN MKPGPTSERN YGLFKPDGTP AYSLGISSTS NVAGSNTTTG 360 GTNGKPLSPI PTPPSTPTSS STGYLSISPA TVNTSSRGPC CLLL* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-6 | 56 | 323 | 274 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-92 | 29 | 344 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PIR | 0 | 22 | 352 | 26 | 356 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
RefSeq | XP_002278950.1 | 0 | 34 | 398 | 33 | 389 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300505.1 | 0 | 7 | 346 | 1 | 333 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317055.1 | 0 | 24 | 349 | 1 | 326 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518930.1 | 0 | 1 | 390 | 1 | 381 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 28 | 347 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_C | 0 | 28 | 347 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_B | 0 | 28 | 347 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_A | 0 | 28 | 347 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3em5_D | 0 | 28 | 347 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |