y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G085300.3 |
Family | GH17 |
Protein Properties | Length: 383 Molecular Weight: 42433.3 Isoelectric Point: 4.9777 |
Chromosome | Chromosome/Scaffold: 09 Start: 6204332 End: 6208496 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 30 | 346 | 0 |
VGINYGQIANNLPSPARVSYLLRSLNISRVKLYDADPNVLLAFANTNVEFIIGLGNEYLQNMTDPIKAQNWIQQRVQPYLTRTKITCITVGNEVYKTYDH QLWSNLLPAMQTVYNTLVNLGLDKQVTVTTAHSLDILSLSFPPSVGAFRQDLGEYLHGILNFHAQVKSPFLINAYPYFAYKDKPNEVPLNYVLFQPNQGT MDPSTNLKYDNMLFAQIDAVYSAIKAMGHTDIEVRISETGWPSRGDENEVGATPENAGLYNGNLLRRIEEKQGTPAKPNVPIDIYVFALFNENQKPGPTS ERNYGLFYPDGTPVYNI |
Full Sequence |
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Protein Sequence Length: 383 Download |
MAASSSLLFT LLLVLLTFSD SSVQTLGLEV GINYGQIANN LPSPARVSYL LRSLNISRVK 60 LYDADPNVLL AFANTNVEFI IGLGNEYLQN MTDPIKAQNW IQQRVQPYLT RTKITCITVG 120 NEVYKTYDHQ LWSNLLPAMQ TVYNTLVNLG LDKQVTVTTA HSLDILSLSF PPSVGAFRQD 180 LGEYLHGILN FHAQVKSPFL INAYPYFAYK DKPNEVPLNY VLFQPNQGTM DPSTNLKYDN 240 MLFAQIDAVY SAIKAMGHTD IEVRISETGW PSRGDENEVG ATPENAGLYN GNLLRRIEEK 300 QGTPAKPNVP IDIYVFALFN ENQKPGPTSE RNYGLFYPDG TPVYNIGVQG YLPELIYSSA 360 TTNNGFSICS LLVLAIAYLI SS* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-6 | 57 | 339 | 294 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-95 | 30 | 346 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94377.1 | 0 | 21 | 382 | 18 | 379 | unknown [Populus trichocarpa] |
GenBank | ACU21124.1 | 0 | 23 | 377 | 30 | 390 | unknown [Glycine max] |
RefSeq | NP_565652.1 | 0 | 22 | 380 | 21 | 382 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002328249.1 | 0 | 22 | 370 | 21 | 370 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523810.1 | 0 | 27 | 364 | 10 | 347 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 29 | 346 | 1 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_C | 0 | 29 | 346 | 1 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_B | 0 | 29 | 346 | 1 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_A | 0 | 29 | 346 | 1 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3em5_D | 0 | 29 | 346 | 1 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |