y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G192200.3 |
Family | GH17 |
Protein Properties | Length: 386 Molecular Weight: 42420.7 Isoelectric Point: 8.5037 |
Chromosome | Chromosome/Scaffold: 01 Start: 17498760 End: 17500229 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 22 | 340 | 0 |
GVNYGRIADNLPSPRSVVTLLKAAKIKNTRIYDADHEVLKAFKGSGIGIIVGLGNGYLKEIAVGEDRAMNWIKENVQPFLPGTNIAGIAVGNEILGGDDH ELWEVLLPAVKNVYDALRRLDLTKVVEVSSPHSEAVFTNSFPPSSCVFREDVSIYMKPLLQFFSQIGSPFYINAYPFLAYKSDPEHIDINYALFKSNKGI LDAKTNLHYDNMFEAQVDAAYAALDKAGFPKMEVIVSETGWASRGDDNEAGASLENARTYNRNLRKRLAKKKGTPYRPKFVAKAYIFALFNENLKPGPTS ERNFGLFKPDGSISYDIGF |
Full Sequence |
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Protein Sequence Length: 386 Download |
MVLFYMLCSA VFTVYAFKGT YGVNYGRIAD NLPSPRSVVT LLKAAKIKNT RIYDADHEVL 60 KAFKGSGIGI IVGLGNGYLK EIAVGEDRAM NWIKENVQPF LPGTNIAGIA VGNEILGGDD 120 HELWEVLLPA VKNVYDALRR LDLTKVVEVS SPHSEAVFTN SFPPSSCVFR EDVSIYMKPL 180 LQFFSQIGSP FYINAYPFLA YKSDPEHIDI NYALFKSNKG ILDAKTNLHY DNMFEAQVDA 240 AYAALDKAGF PKMEVIVSET GWASRGDDNE AGASLENART YNRNLRKRLA KKKGTPYRPK 300 FVAKAYIFAL FNENLKPGPT SERNFGLFKP DGSISYDIGF TGLKESSGVS SFIHFKVIGA 360 YGWLGSSCAL LLTTCITLVL LISAS* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 8.0e-97 | 22 | 340 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN70046.1 | 0 | 12 | 383 | 20 | 381 | hypothetical protein [Vitis vinifera] |
EMBL | CBI36326.1 | 0 | 12 | 381 | 31 | 395 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265779.1 | 0 | 10 | 343 | 19 | 352 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299750.1 | 0 | 10 | 357 | 6 | 353 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327527.1 | 0 | 14 | 356 | 1 | 342 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 22 | 340 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 22 | 340 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 22 | 341 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 22 | 341 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_B | 0 | 22 | 341 | 3 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |