y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si006581m |
Family | GH17 |
Protein Properties | Length: 403 Molecular Weight: 43499.9 Isoelectric Point: 7.0395 |
Chromosome | Chromosome/Scaffold: 4 Start: 27098934 End: 27102917 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 35 | 353 | 0 |
LGINYGQVGNNLPSPPHVVQLLTSLRIGKVRIYDVNPQVLSAFAGTGIELIVTVPDDLVPGMAASASQALQWVTAGVRPYFPATRVTGIAVGNEVFTGDD EQLKASLVPAMRNLHAALAQLGMDTYVRVSTANSLAVLATSYPPSQGVFTQDAAPYMAQLLRFLADTSTPFWINAYPYFAYKDDPTKVSLDYALSNPYHV GAVDPYTHLQYTSMLYAQVDAVTFAAARLGYGNVPVHVSETGWPSKGDANEAGATVENARQYNRNLLMRQVSGEGTPLRPKLRLEVYLFALFNEDMKPGP TSERNYGLYQPDMSMVYNV |
Full Sequence |
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Protein Sequence Length: 403 Download |
MAFTLLSRSP RLVICALLCI FLFSEVGVPR RASALGINYG QVGNNLPSPP HVVQLLTSLR 60 IGKVRIYDVN PQVLSAFAGT GIELIVTVPD DLVPGMAASA SQALQWVTAG VRPYFPATRV 120 TGIAVGNEVF TGDDEQLKAS LVPAMRNLHA ALAQLGMDTY VRVSTANSLA VLATSYPPSQ 180 GVFTQDAAPY MAQLLRFLAD TSTPFWINAY PYFAYKDDPT KVSLDYALSN PYHVGAVDPY 240 THLQYTSMLY AQVDAVTFAA ARLGYGNVPV HVSETGWPSK GDANEAGATV ENARQYNRNL 300 LMRQVSGEGT PLRPKLRLEV YLFALFNEDM KPGPTSERNY GLYQPDMSMV YNVGLNQLST 360 TSAASLSLAT SPATRTDVRK DFGSLCLVTS LAILLITQAL LL* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 9.0e-9 | 33 | 346 | 329 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-104 | 35 | 353 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD54223.1 | 0 | 1 | 357 | 1 | 360 | putative beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
GenBank | EEC80746.1 | 0 | 14 | 382 | 5 | 380 | hypothetical protein OsI_23229 [Oryza sativa Indica Group] |
RefSeq | NP_001057782.1 | 0 | 14 | 394 | 5 | 386 | Os06g0531000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130652.1 | 0 | 1 | 398 | 1 | 401 | hypothetical protein LOC100191753 [Zea mays] |
RefSeq | XP_002437077.1 | 0 | 1 | 381 | 4 | 387 | hypothetical protein SORBIDRAFT_10g020900 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 35 | 353 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 35 | 353 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 35 | 355 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 35 | 356 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 35 | 356 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |