y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30055.m001564 |
Family | GH17 |
Protein Properties | Length: 389 Molecular Weight: 43089.8 Isoelectric Point: 5.6328 |
Chromosome | Chromosome/Scaffold: 30055 Start: 235923 End: 237267 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 13 | 329 | 0 |
VGINYGQIANNLPSPSRVAYLLQSLNISRVKLYDADPNVLVAFSNSNVDFIVGLGNEYLQNMTDPIKAQTWIQQHLQPHLPQTKITCITVGNEVFNSNDT QLRSYLLPAMQTVYHALVNLGLDKQVIVTSAHSLTILAYSYPPSAGTFRQDLAEYIQPLLNFHSQINSPFLINAYPFFAYKDNPNQVSIEYALFQPNQGM TDPITNLKYDNMLYAQIDAVYSAIRAMGHTDIEVRISETGWPSKGDSDEAGATSENAGLYNGNLLQRIQEKQGTPAKPSVPIDVYVFALFNEDLKPGPTS ERNYGLFYPDGTPVYNI |
Full Sequence |
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Protein Sequence Length: 389 Download |
MNVNFARIQG LGVGINYGQI ANNLPSPSRV AYLLQSLNIS RVKLYDADPN VLVAFSNSNV 60 DFIVGLGNEY LQNMTDPIKA QTWIQQHLQP HLPQTKITCI TVGNEVFNSN DTQLRSYLLP 120 AMQTVYHALV NLGLDKQVIV TSAHSLTILA YSYPPSAGTF RQDLAEYIQP LLNFHSQINS 180 PFLINAYPFF AYKDNPNQVS IEYALFQPNQ GMTDPITNLK YDNMLYAQID AVYSAIRAMG 240 HTDIEVRISE TGWPSKGDSD EAGATSENAG LYNGNLLQRI QEKQGTPAKP SVPIDVYVFA 300 LFNEDLKPGP TSERNYGLFY PDGTPVYNIG LQGYLPELTY SSACKINVGI QSSPFSKLKS 360 GDLCSGMRNL CLGAPEFIGR DFVMIQRKS 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-9 | 7 | 322 | 332 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-98 | 13 | 329 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94377.1 | 0 | 6 | 347 | 20 | 361 | unknown [Populus trichocarpa] |
GenBank | ACU21124.1 | 0 | 5 | 342 | 29 | 366 | unknown [Glycine max] |
RefSeq | XP_002312820.1 | 0 | 6 | 348 | 20 | 362 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002328249.1 | 0 | 6 | 348 | 22 | 365 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523810.1 | 0 | 1 | 389 | 1 | 389 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 13 | 329 | 2 | 313 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
PDB | 3f55_C | 0 | 13 | 329 | 2 | 313 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
PDB | 3f55_B | 0 | 13 | 329 | 2 | 313 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
PDB | 3f55_A | 0 | 13 | 329 | 2 | 313 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
PDB | 3em5_D | 0 | 13 | 329 | 2 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY269000 | 304 | 7 | 309 | 0 |
HO825834 | 339 | 8 | 345 | 0 |
HO810153 | 339 | 8 | 345 | 0 |
EX667194 | 291 | 20 | 310 | 0 |
GR996037 | 283 | 50 | 332 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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