y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01021499001 |
Family | GH17 |
Protein Properties | Length: 376 Molecular Weight: 41196 Isoelectric Point: 4.6793 |
Chromosome | Chromosome/Scaffold: 10 Start: 6192248 End: 6193694 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 35 | 350 | 0 |
GINYGQIGNNLPQPEKVLDLLSSLKITKTKIYDTNPQILTAFANSGIELIVTVENDKLSDLTDPQQALQWVSSRIKPYFPATKITGIAVGNEIFTGDDMT LMSYLVPAMISIHGALVQLGLESYIQVSTPNSLAVLAESYPPSAGSFQGELTGVMSQFLRFLSNTKSPFWINAYPYFAYKDSPTQISLDYVLFNPNSGMV DPYTKLHYDNMLYAQVDAVICAIARMGFEGLEVKVTETGWPSKGDVDEVGATVENAAIYNRNLLRRQLENEGTPLRPNMRLEVYLFALFNEDLKPGPTSE RNYGLYQPDGTMAYNV |
Full Sequence |
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Protein Sequence Length: 376 Download |
MAATFMSRIS MFHAFILSAL FFSDCGFLRG VASFGINYGQ IGNNLPQPEK VLDLLSSLKI 60 TKTKIYDTNP QILTAFANSG IELIVTVEND KLSDLTDPQQ ALQWVSSRIK PYFPATKITG 120 IAVGNEIFTG DDMTLMSYLV PAMISIHGAL VQLGLESYIQ VSTPNSLAVL AESYPPSAGS 180 FQGELTGVMS QFLRFLSNTK SPFWINAYPY FAYKDSPTQI SLDYVLFNPN SGMVDPYTKL 240 HYDNMLYAQV DAVICAIARM GFEGLEVKVT ETGWPSKGDV DEVGATVENA AIYNRNLLRR 300 QLENEGTPLR PNMRLEVYLF ALFNEDLKPG PTSERNYGLY QPDGTMAYNV GLSALSTTSS 360 TATISLTSSA TKVQP* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-5 | 72 | 343 | 276 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 8.0e-96 | 35 | 350 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM96962.1 | 0 | 3 | 351 | 2 | 353 | putative beta-1,3-glucanase precursor [Arabidopsis thaliana] |
RefSeq | XP_002270153.1 | 0 | 1 | 375 | 1 | 375 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306003.1 | 0 | 31 | 352 | 1 | 322 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332000.1 | 0 | 3 | 374 | 2 | 375 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519678.1 | 0 | 11 | 351 | 1 | 340 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 35 | 350 | 2 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 35 | 353 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 35 | 353 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 35 | 353 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 35 | 353 | 3 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |