y
Basic Information | |
---|---|
Species | Oryza sativa |
Cazyme ID | LOC_Os02g33000.1 |
Family | GH17 |
Protein Properties | Length: 392 Molecular Weight: 41805.2 Isoelectric Point: 7.3208 |
Chromosome | Chromosome/Scaffold: 2 Start: 19619243 End: 19623844 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 39 | 356 | 0 |
IGVNYGQIANNLPSPSRVSWLLRSLKISKVKLFDADPHVLRAFLGTGVEFVVGIGNEAVPAMASPAAAESWLQLHVVPHLRAGARITCITVGNEVFKGND TALQASLLPALRSVHQALGALGLQGRVNVTTAHSLDIMGVSYPPSAGAFHPSAAPHLQPFLAFLSAARAPFLINCYPYFAYKDDPARVPLEYVLFQPNAG VVDPRTRLVYDNMLYAQVDAVYAAIQAMGHTDIDVKVSETGWPSRGDPDEAGATPENAGTYIGNLLRRIEMKQGTPLRPQAPIDVYVFALFNENLKPGPA SERNYGLFYPDGTPVYNV |
Full Sequence |
---|
Protein Sequence Length: 392 Download |
MATAARAASC TPAACAVLVI PILVLIMAGQ VRVAEALSIG VNYGQIANNL PSPSRVSWLL 60 RSLKISKVKL FDADPHVLRA FLGTGVEFVV GIGNEAVPAM ASPAAAESWL QLHVVPHLRA 120 GARITCITVG NEVFKGNDTA LQASLLPALR SVHQALGALG LQGRVNVTTA HSLDIMGVSY 180 PPSAGAFHPS AAPHLQPFLA FLSAARAPFL INCYPYFAYK DDPARVPLEY VLFQPNAGVV 240 DPRTRLVYDN MLYAQVDAVY AAIQAMGHTD IDVKVSETGW PSRGDPDEAG ATPENAGTYI 300 GNLLRRIEMK QGTPLRPQAP IDVYVFALFN ENLKPGPASE RNYGLFYPDG TPVYNVGLRG 360 YLPPMASHEA ATQVIHWFLL IATASVVFAL S* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-7 | 124 | 349 | 230 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-93 | 39 | 356 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0003824 | catalytic activity |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005488 | binding |
GO:0005634 | nucleus |
GO:0005737 | cytoplasm |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH67163.1 | 0 | 12 | 391 | 13 | 393 | H0717B12.10 [Oryza sativa (indica cultivar-group)] |
GenBank | EAY86149.1 | 0 | 1 | 391 | 1 | 391 | hypothetical protein OsI_07522 [Oryza sativa Indica Group] |
GenBank | EAZ23309.1 | 0 | 1 | 391 | 1 | 372 | hypothetical protein OsJ_07006 [Oryza sativa Japonica Group] |
RefSeq | NP_001047027.1 | 0 | 1 | 391 | 1 | 391 | Os02g0532900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002452203.1 | 0 | 1 | 391 | 1 | 409 | hypothetical protein SORBIDRAFT_04g021700 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 39 | 358 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 39 | 358 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 39 | 358 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 39 | 358 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 39 | 358 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |