y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10016756m |
Family | GH17 |
Protein Properties | Length: 397 Molecular Weight: 44214.7 Isoelectric Point: 7.253 |
Chromosome | Chromosome/Scaffold: 10 Start: 2641153 End: 2643981 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 33 | 350 | 0 |
VGINYGQIANNLPSPARVAVLLRSLNITRVKLYDADPNVLFSFSNSQVDFMIGLGNELLQNMSTDPTKAETWIQQRLQPHISKTRITSIVVGNEIFKTND RVLISSLLPAMKSVYSALLSLGLEKQVTVTSAHSLDILQTSYPPSSGSFKEEFVQFLQPLLDFHSQIKSPFLINAYPFFAYKDSPKEIPLEYALFQPNHG MIDPNTNLHYDNMLFAQVDALYSAVKTLGHTDIEIRISETGWPSKGDVDEIGASPENAALYNGNLLRLVEQRKGTPAKQSVPIDVYVFALFNENLKPGPT SERNYGLFYPDGKPVYNV |
Full Sequence |
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Protein Sequence Length: 397 Download |
MSTTHSLSFF FFRVLLLFLI RSEESVRVNS QGVGINYGQI ANNLPSPARV AVLLRSLNIT 60 RVKLYDADPN VLFSFSNSQV DFMIGLGNEL LQNMSTDPTK AETWIQQRLQ PHISKTRITS 120 IVVGNEIFKT NDRVLISSLL PAMKSVYSAL LSLGLEKQVT VTSAHSLDIL QTSYPPSSGS 180 FKEEFVQFLQ PLLDFHSQIK SPFLINAYPF FAYKDSPKEI PLEYALFQPN HGMIDPNTNL 240 HYDNMLFAQV DALYSAVKTL GHTDIEIRIS ETGWPSKGDV DEIGASPENA ALYNGNLLRL 300 VEQRKGTPAK QSVPIDVYVF ALFNENLKPG PTSERNYGLF YPDGKPVYNV GLQGYLPDII 360 YSSSAATIKI LNLWRAVMGL SVAGFIIEMG VKTRMR* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-5 | 101 | 343 | 246 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 7.0e-99 | 33 | 350 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001031432.1 | 0 | 83 | 396 | 1 | 314 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_565652.1 | 0 | 25 | 396 | 21 | 392 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_973548.1 | 0 | 25 | 370 | 21 | 366 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002328249.1 | 0 | 25 | 370 | 21 | 365 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523810.1 | 0 | 26 | 365 | 6 | 344 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 33 | 350 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 33 | 350 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 33 | 350 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 33 | 350 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 33 | 350 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |