y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10007671m |
Family | GH17 |
Protein Properties | Length: 438 Molecular Weight: 46254.9 Isoelectric Point: 7.0744 |
Chromosome | Chromosome/Scaffold: 5 Start: 2144024 End: 2146093 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 30 | 349 | 0 |
IGVNYGQIGDNLPSPEQVVPLVKSIGATKVKLYDANPQILKAFSGTGVEFIVGLGNEYLSKMRDPSKALTWIKQNVTPFLPATNITCITIGNEILALNDS SLADNLLPAMQGVHSALITAGLSDQIAVTTAHSLSILQTSFPPSAGEFHPDLIDTLKPILEFHRKTDSPFLINAYPFFAYKGNPKEIPLDFVLFQPNQGI VDPATGFRYENMLFSQIDAVYSALAAAGYKSLKVQISETGWPSKGDDDEFGATPENAKRYNGNLIKMMMGKKTKTPLRPNNDLIVYVFALFNENMKPGPT SERNYGLFKPDGTQAYSLGF |
Full Sequence |
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Protein Sequence Length: 438 Download |
MELNTFHRSS SSLLFLLSVV VIFPATVISI GVNYGQIGDN LPSPEQVVPL VKSIGATKVK 60 LYDANPQILK AFSGTGVEFI VGLGNEYLSK MRDPSKALTW IKQNVTPFLP ATNITCITIG 120 NEILALNDSS LADNLLPAMQ GVHSALITAG LSDQIAVTTA HSLSILQTSF PPSAGEFHPD 180 LIDTLKPILE FHRKTDSPFL INAYPFFAYK GNPKEIPLDF VLFQPNQGIV DPATGFRYEN 240 MLFSQIDAVY SALAAAGYKS LKVQISETGW PSKGDDDEFG ATPENAKRYN GNLIKMMMGK 300 KTKTPLRPNN DLIVYVFALF NENMKPGPTS ERNYGLFKPD GTQAYSLGFT LNDVVKGSSG 360 GDDGGNSSSG GGGGGGGGGG GGGGGGGKMP VSPVMPVAPD SASTGYLAIS SAPGKRKGTV 420 AILLMMVSML LGERRFL* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-6 | 101 | 326 | 230 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 9.0e-101 | 30 | 349 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF31288.1 | 0 | 1 | 413 | 1 | 401 | AC006424_17 CDS [Arabidopsis thaliana] |
RefSeq | NP_174563.2 | 0 | 1 | 434 | 1 | 424 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002278950.1 | 0 | 36 | 423 | 33 | 391 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300505.1 | 0 | 21 | 348 | 6 | 332 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518930.1 | 0 | 11 | 433 | 10 | 402 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 30 | 350 | 2 | 316 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3f55_C | 0 | 30 | 350 | 2 | 316 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3f55_B | 0 | 30 | 350 | 2 | 316 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3f55_A | 0 | 30 | 350 | 2 | 316 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3em5_D | 0 | 30 | 350 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |