y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00064551m |
Family | GH17 |
Protein Properties | Length: 477 Molecular Weight: 49209.6 Isoelectric Point: 5.3003 |
Chromosome | Chromosome/Scaffold: 0118922 Start: 1288 End: 3157 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 32 | 345 | 0 |
IGVNYGTKGDNLPPPAKVASFLTNRTRIDRVKLFDTNADMVRAFAGTGIALMVTAGNGDIPKLATKDGAAAWVSANVAPYYPATDISLVAVGNEIMATAD KSLITSLVPAMRALKAALVAAGYPRIRVSTPHSLGILSVSEPPSASRFRDGFDRAVFAPMLEFHRQTRSPFMVNPYPYFGYNGDTLAYALARPNPGVPDP GTGITYTSMFEAQLDAVFSAMKKLGFGDVEIAVGETGWPSKAEDGQVGVSAAEAAEYNRYLIGEASAGSGTPLMPKRTFETYIFSLFNENLKPGPVAERN FGLFQADLTPVYDV |
Full Sequence |
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Protein Sequence Length: 477 Download |
MAPPSRQKRH HAAVVLAAFL LLLVAPPYTA AIGVNYGTKG DNLPPPAKVA SFLTNRTRID 60 RVKLFDTNAD MVRAFAGTGI ALMVTAGNGD IPKLATKDGA AAWVSANVAP YYPATDISLV 120 AVGNEIMATA DKSLITSLVP AMRALKAALV AAGYPRIRVS TPHSLGILSV SEPPSASRFR 180 DGFDRAVFAP MLEFHRQTRS PFMVNPYPYF GYNGDTLAYA LARPNPGVPD PGTGITYTSM 240 FEAQLDAVFS AMKKLGFGDV EIAVGETGWP SKAEDGQVGV SAAEAAEYNR YLIGEASAGS 300 GTPLMPKRTF ETYIFSLFNE NLKPGPVAER NFGLFQADLT PVYDVGLMKD GVKTAPAPAP 360 AAAQQTSAEE AGAPPESSKA AKKRDREASA PAETATAPAS GDDDAAGPSP AGAPAATEGG 420 STAGDDKTTD GEGSTEKKPG TSPALDGAAS AAAADLLVPI SSMLTVTAAL SLAFHM* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 2.0e-82 | 32 | 345 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ03332.1 | 0 | 35 | 476 | 32 | 501 | hypothetical protein OsI_25474 [Oryza sativa Indica Group] |
RefSeq | NP_001059262.1 | 0 | 35 | 476 | 32 | 501 | Os07g0240200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151227.1 | 0 | 1 | 472 | 1 | 494 | glucan endo-1,3-beta-glucosidase [Zea mays] |
RefSeq | XP_002283647.1 | 0 | 14 | 380 | 12 | 376 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002459582.1 | 0 | 29 | 474 | 31 | 542 | hypothetical protein SORBIDRAFT_02g007050 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 32 | 345 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 32 | 345 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 32 | 347 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 32 | 347 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 32 | 347 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |