y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G260000.4 |
Family | GH17 |
Protein Properties | Length: 390 Molecular Weight: 42215.9 Isoelectric Point: 5.3391 |
Chromosome | Chromosome/Scaffold: 08 Start: 54132460 End: 54134878 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 28 | 344 | 0 |
IGINYGQIADNLPSPENVVPLVKSIGVTKVKLYDADPRVLGAFANSGVEFMIGLGNGDLEKMRDPNNAQDWVKQNVQAHLPDTKITCIFVGNEVLTFNDT NLSDNLVPAMQSVHTALVNLGLDKQVTVTTAHSLGILQTSFPPSAGAFREDLVDILSQTLSFHQKTGSPFLINAYPFFAYKGNPKQVSLDFVLFQPNQGI IDPTTNLHYDNMLYAQIDAVYSALASLGYKKLPVHISETGWPTKGDEDEAGATPDNAKKYNGNLIKLMSQNAGTPLRPDSDLNIYVFALFNENMKPGPTS ERNYGLFKPDGTPAYAL |
Full Sequence |
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Protein Sequence Length: 390 Download |
MELMRIFSYA SIILSISVYL LPIMVNSIGI NYGQIADNLP SPENVVPLVK SIGVTKVKLY 60 DADPRVLGAF ANSGVEFMIG LGNGDLEKMR DPNNAQDWVK QNVQAHLPDT KITCIFVGNE 120 VLTFNDTNLS DNLVPAMQSV HTALVNLGLD KQVTVTTAHS LGILQTSFPP SAGAFREDLV 180 DILSQTLSFH QKTGSPFLIN AYPFFAYKGN PKQVSLDFVL FQPNQGIIDP TTNLHYDNML 240 YAQIDAVYSA LASLGYKKLP VHISETGWPT KGDEDEAGAT PDNAKKYNGN LIKLMSQNAG 300 TPLRPDSDLN IYVFALFNEN MKPGPTSERN YGLFKPDGTP AYALGVTNNN TGSGSIGNGV 360 TMPFSPTSSS TGYLSISSAT VRAFSRFYC* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-7 | 29 | 323 | 310 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 6.0e-93 | 28 | 344 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PIR | 0 | 22 | 346 | 26 | 350 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
RefSeq | XP_002278950.1 | 0 | 34 | 386 | 33 | 388 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300505.1 | 0 | 20 | 346 | 7 | 333 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317055.1 | 0 | 24 | 347 | 1 | 324 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518930.1 | 0 | 1 | 379 | 1 | 381 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 344 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 28 | 344 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 28 | 344 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 28 | 344 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 28 | 344 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |