y
Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10028122 |
Family | GH17 |
Protein Properties | Length: 389 Molecular Weight: 42588.3 Isoelectric Point: 6.2499 |
Chromosome | Chromosome/Scaffold: 327 Start: 69183 End: 70625 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 35 | 353 | 0 |
LGINYGQVGNNLPQPDKVMDLLASLRVTKTRIYDTNPQILTAFANSQIELIVTVENQMLSTLTDPQQAFQWVTTHIKPYFPATRITGISVGNEVFTAEND DTTLLSNLVPAIVNIHTALVQLGLDRYIQISTAHSLAVLDQSYPPSAGTFKQEVSSAMSQFLQFLSVTKSPFWINAYPYFAYKDDPATIPLDYVLFNPNQ GMVDPYTGLHYDNMLYAMVDAVIFAMAKLGFGRIEVRVSETGWPSRGDANEVGATVQNAASYNKNLLRRQLGNQGTPLRPRRRLEVYLFALFNEDMKPGP TSERNYGLYQPDLTMVYNV |
Full Sequence |
---|
Protein Sequence Length: 389 Download |
MHQQSSSHEI FVVLVLLLSL SLSSDYGVVK RVTSLGINYG QVGNNLPQPD KVMDLLASLR 60 VTKTRIYDTN PQILTAFANS QIELIVTVEN QMLSTLTDPQ QAFQWVTTHI KPYFPATRIT 120 GISVGNEVFT AENDDTTLLS NLVPAIVNIH TALVQLGLDR YIQISTAHSL AVLDQSYPPS 180 AGTFKQEVSS AMSQFLQFLS VTKSPFWINA YPYFAYKDDP ATIPLDYVLF NPNQGMVDPY 240 TGLHYDNMLY AMVDAVIFAM AKLGFGRIEV RVSETGWPSR GDANEVGATV QNAASYNKNL 300 LRRQLGNQGT PLRPRRRLEV YLFALFNEDM KPGPTSERNY GLYQPDLTMV YNVGLSGPTG 360 TTSTATSTAS VSSSPASNSV SSAATKVN* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 266 | 346 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-95 | 35 | 353 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_193568.2 | 0 | 6 | 382 | 7 | 377 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002270153.1 | 0 | 16 | 354 | 15 | 351 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002306003.1 | 0 | 32 | 355 | 1 | 322 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332000.1 | 0 | 17 | 387 | 16 | 374 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519678.1 | 0 | 14 | 354 | 4 | 340 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 35 | 356 | 2 | 316 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3f55_C | 0 | 35 | 356 | 2 | 316 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3f55_B | 0 | 35 | 356 | 2 | 316 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3f55_A | 0 | 35 | 356 | 2 | 316 | A Chain A, Crystal Structure Of The Polygalacturonase From Colletotrichum Lupini And Its Implications For The Interaction With Polygalacturonase- Inhibiting Proteins |
PDB | 3em5_D | 0 | 35 | 356 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |