y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G182500.1 |
Family | GH17 |
Protein Properties | Length: 435 Molecular Weight: 46876.3 Isoelectric Point: 5.1837 |
Chromosome | Chromosome/Scaffold: 14 Start: 15482483 End: 15485236 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 28 | 345 | 0 |
IGINYGQVADNLPPPPSTAKLLQSTSIQKVRLYGSDPTIIKALANTGIGIVVGTANGDIPGLASGPNFAESWINTNVLPFYPASNIILITVGNEVMTSND QNLVNKLLPAMQNVQNALNDASLGGKIKVSTVHSMGVLKQSEPPSSGSFDPSYGDLMKGLLEFNSANGSPFAINPYPYYAYRSDTRPETLAFCLFQPNAG RMDGNIKIKYMNMFDAQVDAVYSALNSMGFKNVEIVVAETGWPFKGDDNDVGPSIENAKAYNGNLIAHLRSMVGTPLMPGKSVDTYLFALYDEDLKPGRG SERSFGLFKTDLTMVYDV |
Full Sequence |
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Protein Sequence Length: 435 Download |
MVVLPYTVAF LLLSSLQTVK IANSQSFIGI NYGQVADNLP PPPSTAKLLQ STSIQKVRLY 60 GSDPTIIKAL ANTGIGIVVG TANGDIPGLA SGPNFAESWI NTNVLPFYPA SNIILITVGN 120 EVMTSNDQNL VNKLLPAMQN VQNALNDASL GGKIKVSTVH SMGVLKQSEP PSSGSFDPSY 180 GDLMKGLLEF NSANGSPFAI NPYPYYAYRS DTRPETLAFC LFQPNAGRMD GNIKIKYMNM 240 FDAQVDAVYS ALNSMGFKNV EIVVAETGWP FKGDDNDVGP SIENAKAYNG NLIAHLRSMV 300 GTPLMPGKSV DTYLFALYDE DLKPGRGSER SFGLFKTDLT MVYDVGLSTS SQVRTKFTCI 360 SLQHHLQSRT NKATWCVPKS GVSDAQLQDN LDFAYGRGID HDPIQPGGAC FEPNTIASLT 420 LPEIHLIPTE LPTE* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-9 | 374 | 410 | 37 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
COG5309 | COG5309 | 3.0e-11 | 56 | 338 | 290 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
smart00768 | X8 | 1.0e-15 | 374 | 418 | 45 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-96 | 28 | 345 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002321273.1 | 0 | 24 | 416 | 1 | 393 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321274.1 | 0 | 1 | 362 | 1 | 362 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329953.1 | 0 | 1 | 376 | 1 | 373 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329954.1 | 0 | 1 | 366 | 1 | 366 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329975.1 | 0 | 1 | 355 | 1 | 355 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 347 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 28 | 348 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 28 | 348 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 28 | 348 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 28 | 348 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |