y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb02g007050.1 |
Family | GH17 |
Protein Properties | Length: 546 Molecular Weight: 56352.5 Isoelectric Point: 5.5243 |
Chromosome | Chromosome/Scaffold: 2 Start: 9052032 End: 9054346 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 34 | 350 | 0 |
IGVNYGTKGDNLPPPATVASFLANRTRIDRVKLFDTNPDMVRAFAGTGIALMVTAGNGDIPKLATKDGAAAWVSANVAPYYPKTDISLVLVGNEIMDTGD ASLISNLVPAMRALRAALVAAGFRKIRVSTPHSLGILAGASEPPSASRFRDGWDRAVFAPMLAFHRQSRSPFMVNPYPYFGYNGATLPYALARPDNKLGV TDPGTGITYTSMFEAQLDSVYSAMKKLGFDDVEIAVGETGWPTKAMDGQIGVSNADAAEYNRYLIGEAGGGSGTPLMPKRTFETYIFALFNENLKPGPVA ERNFGLFYANLTPVYDV |
Full Sequence |
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Protein Sequence Length: 546 Download |
MAAPPSWQRH AAAAVVVSVS LLILVVAPSS TTAIGVNYGT KGDNLPPPAT VASFLANRTR 60 IDRVKLFDTN PDMVRAFAGT GIALMVTAGN GDIPKLATKD GAAAWVSANV APYYPKTDIS 120 LVLVGNEIMD TGDASLISNL VPAMRALRAA LVAAGFRKIR VSTPHSLGIL AGASEPPSAS 180 RFRDGWDRAV FAPMLAFHRQ SRSPFMVNPY PYFGYNGATL PYALARPDNK LGVTDPGTGI 240 TYTSMFEAQL DSVYSAMKKL GFDDVEIAVG ETGWPTKAMD GQIGVSNADA AEYNRYLIGE 300 AGGGSGTPLM PKRTFETYIF ALFNENLKPG PVAERNFGLF YANLTPVYDV GLMKDGVRAH 360 VLALPLPRRR RAYGGRHCRI GACSDGRFCM RGAMQVKTGA APAPAPAPAA TVASAPESKA 420 AKKDEVEAAA APEETDASAS TPAPSSVEDE GSSEATGPSP SSEKGDSTDE DKTTEEEGGD 480 APPPAAAAAS GHADESSETV AKDGDAAGGG KTPAPAGAES HGGNLRVPVS SVLTIALSSL 540 ALVGI* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 9.0e-78 | 34 | 350 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ03332.1 | 0 | 37 | 542 | 32 | 499 | hypothetical protein OsI_25474 [Oryza sativa Indica Group] |
RefSeq | NP_001059262.1 | 0 | 37 | 542 | 32 | 499 | Os07g0240200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151227.1 | 0 | 3 | 544 | 2 | 496 | glucan endo-1,3-beta-glucosidase [Zea mays] |
RefSeq | XP_002283647.1 | 0 | 15 | 355 | 12 | 346 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002459582.1 | 0 | 1 | 545 | 1 | 545 | hypothetical protein SORBIDRAFT_02g007050 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 34 | 352 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 34 | 352 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 34 | 352 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 34 | 352 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 34 | 352 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |