y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 493031 |
Family | GH17 |
Protein Properties | Length: 398 Molecular Weight: 44375 Isoelectric Point: 8.5323 |
Chromosome | Chromosome/Scaffold: 7 Start: 10919041 End: 10921081 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 34 | 352 | 0 |
LGINYGQVGNNLPSPDKVINLLRSLRITKTRIYDTNPQILSAFANSNIEIIVTIENQVLPLLQDPQQAIQWVNSRIRPYVPATRITGIMVGNELFTDDDS SLIGYMMPAMINIHKALVQLGLDRYIQVSSPSSLAVLGESYPPSAGSFKPEVSSVMQQLLEFLEATKSPFWINAYPYFAYKDNPQEIPIDYVLFNRNIGM TDPNTRLHYDNMMYAQVDAVAFAAAKLGYRNIEVRVAETGWPSKGDVGEIGASPMNAATYNRNLMMRQFAGEGTPARRNARLDVYIFALFNEDMKPGPTS EKNYGIFRPDGSLAYNLGF |
Full Sequence |
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Protein Sequence Length: 398 Download |
MTPRTFTRLS NLIHIFLLLS LVFSGNILER VTSLGINYGQ VGNNLPSPDK VINLLRSLRI 60 TKTRIYDTNP QILSAFANSN IEIIVTIENQ VLPLLQDPQQ AIQWVNSRIR PYVPATRITG 120 IMVGNELFTD DDSSLIGYMM PAMINIHKAL VQLGLDRYIQ VSSPSSLAVL GESYPPSAGS 180 FKPEVSSVMQ QLLEFLEATK SPFWINAYPY FAYKDNPQEI PIDYVLFNRN IGMTDPNTRL 240 HYDNMMYAQV DAVAFAAAKL GYRNIEVRVA ETGWPSKGDV GEIGASPMNA ATYNRNLMMR 300 QFAGEGTPAR RNARLDVYIF ALFNEDMKPG PTSEKNYGIF RPDGSLAYNL GFSTMSTTTA 360 NSESVTYSSS ATKAKRSLEY WTILILAMVQ VVMLRLL* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-7 | 263 | 343 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-92 | 34 | 352 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM96962.1 | 0 | 15 | 395 | 15 | 406 | putative beta-1,3-glucanase precursor [Arabidopsis thaliana] |
EMBL | CAA16806.1 | 0 | 1 | 375 | 1 | 375 | beta-1, 3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_174300.2 | 0 | 15 | 395 | 15 | 406 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_193568.2 | 0 | 1 | 397 | 1 | 397 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002332000.1 | 0 | 12 | 375 | 10 | 375 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 34 | 352 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 34 | 353 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 34 | 353 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 34 | 353 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 34 | 353 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |